Transcript Information: R_Transcript_153059.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value6.2E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.092719411834
Replicate 223.185103934599
Replicate 329.628405771085
Condition 2: 8 Hour
Replicate 124.769485004549
Replicate 236.088218569944
Replicate 333.219549938469
Condition 3: 24 Hour
Replicate 129.694461086027
Replicate 222.481036089237
Replicate 331.268149552711


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153059.p1 GENE.R_Transcript_153059~~R_Transcript_153059.p1 ORF type:complete len:259 (+),score=31.90,zf-CCHC|PF00098.19|3e-06,zf-CCHC|PF00098.19|0.00076,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.0077,zf-CCHC|PF00098.19|0.012,zf-CCHC|PF00098.19|2.5e-05,zf-CCHC|PF00098.19|0.00031,zf-CCHC|PF00098.19|0.075,zf-CCHC|PF00098.19|0.0008,zf-CCHC_4|PF14392.2|1.5,zf-CCHC_4|PF14392.2|0.18,zf-CCHC_4|PF14392.2|4.8,zf-CCHC_4|PF14392.2|0.24,zf-CCHC_4|PF14392.2|21,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|0.083,zf-CCHC_4|PF14392.2|7.9e+03,zf-CCHC_4|PF14392.2|0.51,zf-CCHC_3|PF13917.2|0.049,zf-CCHC_3|PF13917.2|0.85,zf-CCHC_3|PF13917.2|74,zf-CCHC_3|PF13917.2|1.6,zf-CCHC_3|PF13917.2|7.7,zf-CCHC_3|PF13917.2|0.00074,zf-CCHC_2|PF13696.2|0.0026,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|6e+02,zf-CCHC_2|PF13696.2|20,zf-CCHC_2|PF13696.2|1.4,zf-CCHC_2|PF13696.2|1.9,zf-CCHC_2|PF13696.2|0.0026,zf-CCHC_2|PF13696.2|0.11 R_Transcript_153059:268-1044(+)
ATGAGCAGAGACAGTATGAGCAGGAGCAGGAGCACTAGCAGGAGTAGGAGTCGAAGCCAGAGCCCTATGAATCGAAAGTTTCGCACTGAGCGCCATTCTCATCGAACTGCTCCTTATGTGAGAGAGGCGCGTCAGGGTGTCAGCCAGATCAACTTATGCAAGAATTGCAAGCGCCCGGGTCACTTTGCTAGAGAATGCCCTAATGTGGGCATATGTCATAATTGCGGTCTTCCTGGGCATATTGCTCTGGAATGTACCACAAAATCTCTTTGTTGGAACTGTCGAGAACCTGGTCACACAGCCGGTAACTGCCCTAATGAGGGCATCTGCCACAGATGTGGCCTGGGTGGTCACCAAGCCAGGGACTGTTCTGCTCCCCCACCACCACCAGGTGATGCAAGGATGTGTAACAACTGTTACAAGCAAGGCCATATAGCAGCGGATTGTACCAATGACAAGGCCTGCAACAATTGTAGGAGGACAGGTCACTTGGCTCGGGACTGTAAAAATGAACCTGTATGCAACCTGTGCAATGTGTCGGGACATGTTGCAAAAGACTGTCCTAAGGCTGATGTTTTGGCTGGGAGAGGGGGTGGGATCCGTGGTGGCCCTCGTGGTGGTTTCCGAGATGTTGTATGCAGAAACTACCAGCAGCTAGGTCATATGAGCAGGGACTGCATCGCGCCTGTAATATGCCATATGTGTGGAGGGCGTGGTCATCTGGCATTTGAATGCCCTTCTGGGAGGTACTTGGACCGTTATCCTAGGAGGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153059.p1 GENE.R_Transcript_153059~~R_Transcript_153059.p1 ORF type:complete len:259 (+),score=31.90,zf-CCHC|PF00098.19|3e-06,zf-CCHC|PF00098.19|0.00076,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.0077,zf-CCHC|PF00098.19|0.012,zf-CCHC|PF00098.19|2.5e-05,zf-CCHC|PF00098.19|0.00031,zf-CCHC|PF00098.19|0.075,zf-CCHC|PF00098.19|0.0008,zf-CCHC_4|PF14392.2|1.5,zf-CCHC_4|PF14392.2|0.18,zf-CCHC_4|PF14392.2|4.8,zf-CCHC_4|PF14392.2|0.24,zf-CCHC_4|PF14392.2|21,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|0.083,zf-CCHC_4|PF14392.2|7.9e+03,zf-CCHC_4|PF14392.2|0.51,zf-CCHC_3|PF13917.2|0.049,zf-CCHC_3|PF13917.2|0.85,zf-CCHC_3|PF13917.2|74,zf-CCHC_3|PF13917.2|1.6,zf-CCHC_3|PF13917.2|7.7,zf-CCHC_3|PF13917.2|0.00074,zf-CCHC_2|PF13696.2|0.0026,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|6e+02,zf-CCHC_2|PF13696.2|20,zf-CCHC_2|PF13696.2|1.4,zf-CCHC_2|PF13696.2|1.9,zf-CCHC_2|PF13696.2|0.0026,zf-CCHC_2|PF13696.2|0.11 R_Transcript_153059:268-1044(+)
MSRDSMSRSRSTSRSRSRSQSPMNRKFRTERHSHRTAPYVREARQGVSQINLCKNCKRPGHFARECPNVGICHNCGLPGHIALECTTKSLCWNCREPGHTAGNCPNEGICHRCGLGGHQARDCSAPPPPPGDARMCNNCYKQGHIAADCTNDKACNNCRRTGHLARDCKNEPVCNLCNVSGHVAKDCPKADVLAGRGGGIRGGPRGGFRDVVCRNYQQLGHMSRDCIAPVICHMCGGRGHLAFECPSGRYLDRYPRRF*

Click here to download the sequence:
Link to NCBI Protein BLAST