Transcript Information: R_Transcript_153072.p1


Annotated TAIR IDAT1G60900.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22424008-22427806 | Forward length=589
E-Value7E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8467920755066
Replicate 25.9714248890389
Replicate 37.1452209015521
Condition 2: 8 Hour
Replicate 14.2681782935565
Replicate 24.1029140993001
Replicate 35.4954417474566
Condition 3: 24 Hour
Replicate 11.8955987619205
Replicate 20.40468364936839
Replicate 33.2128740824803


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153072.p1 GENE.R_Transcript_153072~~R_Transcript_153072.p1 ORF type:5prime_partial len:109 (+),score=25.63,RRM_5|PF13893.2|1.1e-05 R_Transcript_153072:2-328(+)
GATCAATTGTTTCCCACCAAGGTGGTGTGGTTAGGTCAAATGGTCAGGGTGGATGATCTTAAAGATGATGATGAGTATCAAGACATAATGGTTGACGTTCAAGAGGAGGGTCAAAAATTTGGTACCATAGAGAAGATCGTCATCCCACGGCCAGGACCCAATGGAGAACCTGCGATTGGAGTTGGAAAGGTGTTCTTGGAGTATGCTAACATCGATGGTGCTTTTAGAGCTCAAGCAGGATTGAATGGAAGGAAATTATGTGGAAACAAAATTGTGGCCGTGTTCTACTCTGAAAGCAGATTTGCTGAACATGACTATGATGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153072.p1 GENE.R_Transcript_153072~~R_Transcript_153072.p1 ORF type:5prime_partial len:109 (+),score=25.63,RRM_5|PF13893.2|1.1e-05 R_Transcript_153072:2-328(+)
DQLFPTKVVWLGQMVRVDDLKDDDEYQDIMVDVQEEGQKFGTIEKIVIPRPGPNGEPAIGVGKVFLEYANIDGAFRAQAGLNGRKLCGNKIVAVFYSESRFAEHDYDG*

Click here to download the sequence:
Link to NCBI Protein BLAST