Transcript Information: R_Transcript_1531.p2


Annotated TAIR IDAT1G05460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SDE3
Annotation TypeOrtholog
Chromosome Positionchr1:1601357-1604658 | Reverse length=1002
E-Value3E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6353694202817
Replicate 25.64922881156
Replicate 36.77957256209
Condition 2: 8 Hour
Replicate 15.7646094606743
Replicate 27.1193839045927
Replicate 37.6513515619568
Condition 3: 24 Hour
Replicate 19.6772819704224
Replicate 28.703420548748
Replicate 38.6863760752933


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1531.p2 GENE.R_Transcript_1531~~R_Transcript_1531.p2 ORF type:complete len:446 (+),score=95.70,AAA_12|PF13087.2|1.3e-49,AAA_11|PF13086.2|5.1e-12,AAA_11|PF13086.2|3.1e+03 R_Transcript_1531:1742-3079(+)
ATGCAGAAAGGTATCAGGTGGGGGCACTTCTCTCACATAATCCTGGATGAGGCAGGCCAAGCTTCCGAACCAGAGACTATGGTTCCCATTTCTAACCTCTGTCAGAAGAACACTGTGGTTGTTCTTGCTGGAGATCCCTTGCAACTAGGGCCTGTCATCTTCTCTACAAATGCTAAGAAATATGGATTTGGAACATCATACATGGAAAGGCTGTTTGAACATGACCTTTATGGTGAAGGGTATGAAGGTTATGTAACAACATTACGGAGGAACTACCGGTGCCATCCTGAAATTCTCCAGCTGCCTTCAAAATTGTTTTATGAAGAGGAATTGATAGCATGCCGCGAGGCCATGAAATCTACTCCTTGGGCTGATCTCCTTCCTAACAAGGAGTTCCCCATTCTTTTTATTGGTGTCCAAGGGTTCGATGAGAGGGAAGGAGATAATCCCTCATGGTTTAATCGGCTTGAGGCAAGTGTGGTAGTTAAGTTCATCAAGAAGCTAACAATAAGAGATGTCAGAGAGGAAGACTTGGGGGTGATTACCCCTTACCGGCAGCAAGTAGCTAAAATCAAAAGGGCTCTTGAATGTGATGATATGTTTGATGTCAAGATTGGCAGTGTCGAACAGTTTCAAGGACAAGAAAGGGAAGTAATTATCATATCCACTGTCCGCTCGACTATCAAACATGATGAATTTGACAAAATCTATTATTTGGGATTCCTAAGCAATCCTAAAAGGTTCAATGTTTCCATTACTCGAGCTAAATCGTTGCTTGTCATTATTGGGAATCCACATATTATTTGTAAGGATAAATACTGGGCACAACTGTTATGGCGCTGTGTTGACAATGACTCTTATGAGGGCTGTTCTCTTCCTCAAAGGGAAAGCTATGATTACGATATTCCTGCACAGGAGTGTCATCATGCTGCTGATAAAGAGAATTTTGAGGTCAATGCCACGGCTGATCACAGTCAGGAGTTTTCTTGGGACGAATATAAGCCTGTTACGGGTGAAGATCATGGTAAACTTTCTTCTTGGGTGGAAAATAAACCTGTTAATGATCAATGTTTTTCCTGGGAAGAATCTAAACCTGTCCAGGAGGAAGATCAAGCTTATGATCACAGTTGTTCCTGGGAAGAATCTAAACCTGTCCAGGAGGAAGATCAAGCTTATGATCACAGTTGTTCCTGGGAAGAATCTAAACCTGTGAAGGAGGAAGATCAAGCTGATGAACGGGAAGATTTTAAACCTGTTGAGGGCAAAGATCAAGCTTATGAATGGGAAGATTTTAAACCTGTCAAGGATGAAGATGAGTGGTCTGATGGATGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1531.p2 GENE.R_Transcript_1531~~R_Transcript_1531.p2 ORF type:complete len:446 (+),score=95.70,AAA_12|PF13087.2|1.3e-49,AAA_11|PF13086.2|5.1e-12,AAA_11|PF13086.2|3.1e+03 R_Transcript_1531:1742-3079(+)
MQKGIRWGHFSHIILDEAGQASEPETMVPISNLCQKNTVVVLAGDPLQLGPVIFSTNAKKYGFGTSYMERLFEHDLYGEGYEGYVTTLRRNYRCHPEILQLPSKLFYEEELIACREAMKSTPWADLLPNKEFPILFIGVQGFDEREGDNPSWFNRLEASVVVKFIKKLTIRDVREEDLGVITPYRQQVAKIKRALECDDMFDVKIGSVEQFQGQEREVIIISTVRSTIKHDEFDKIYYLGFLSNPKRFNVSITRAKSLLVIIGNPHIICKDKYWAQLLWRCVDNDSYEGCSLPQRESYDYDIPAQECHHAADKENFEVNATADHSQEFSWDEYKPVTGEDHGKLSSWVENKPVNDQCFSWEESKPVQEEDQAYDHSCSWEESKPVQEEDQAYDHSCSWEESKPVKEEDQADEREDFKPVEGKDQAYEWEDFKPVKDEDEWSDGWK*

Click here to download the sequence:
Link to NCBI Protein BLAST