Transcript Information: R_Transcript_153105.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7914022506137
Replicate 21.3122687760186
Replicate 33.5314553794068
Condition 2: 8 Hour
Replicate 12.9587086811255
Replicate 22.1429178431136
Replicate 34.5379026550967
Condition 3: 24 Hour
Replicate 14.7828765057717
Replicate 23.767773393807
Replicate 34.9247335545519


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153105.p1 GENE.R_Transcript_153105~~R_Transcript_153105.p1 ORF type:internal len:240 (-),score=33.82,Ank_2|PF12796.3|0.00024,Ank_2|PF12796.3|4.3e-06,Ank_3|PF13606.2|5.4e+03,Ank_3|PF13606.2|0.014,Ank_3|PF13606.2|65,Ank_3|PF13606.2|3.5,Ank_4|PF13637.2|5.6e-05,Ank_4|PF13637.2|62,Ank_4|PF13637.2|6.1e+02 R_Transcript_153105:1-717(-)
AATGTGAAGGAGCTACCTGTCAAGGATAAAATCGTCATTTCAAACTTCTCGGCACGTTTTCCAATGCACGGAGGAGTGAGAGTGTACAACAACACTACCGGCAGGTTTCTCGCCGGAAAACAGATATTTCCGATGAGCTCCGGCGACGTTGAAGCTGCTTCTCAGAAACTCATCGACGCTTGTCTTGCTGGAGACACGAAGCTTTCTCTCGATCTCCTCGCTGATCCGCTCGTTGATATTGATTTCGTAGGTACGGTGAATTTGAGGTCCAGGAAAACGGAACTCGTTCCGTCTGGTGAGTCGACTCACCGAGTTGAAGTTGAGTACGAGGAGTTTAAGACCGAGGTTACGGCGTTGTTCCTCGCTTCTCACTCCGGGAATCTTCTCCTCGTTAGGAAATTGCTGAGTTTCGGGGCTGATGTAAACAAGAAACTGTTCCGTGGCTATGCAACTACAGCAGCAGTTAGGGAAGGTCATGTTGAAATTCTTGAAGCTCTTCTGAAAGCTGGGGCGTGTCAGCCAGCATGTGAAGAGGCATTAGTGGAGGCGAGTTATGTAGGGCGGGCAAGGCAAGCTGAATTACTTATGGGGTCCAACTTGATTAGCCAGCAGGTAGCAGTTCATGCCCTTGTCACTGCTTGCTCAAGGGGGTTTCTGGATGTTATTGATGTGTTGATTAAGGTAAGCTCCTCTTCTCCTGTAGTCTGTAGAGTGATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153105.p1 GENE.R_Transcript_153105~~R_Transcript_153105.p1 ORF type:internal len:240 (-),score=33.82,Ank_2|PF12796.3|0.00024,Ank_2|PF12796.3|4.3e-06,Ank_3|PF13606.2|5.4e+03,Ank_3|PF13606.2|0.014,Ank_3|PF13606.2|65,Ank_3|PF13606.2|3.5,Ank_4|PF13637.2|5.6e-05,Ank_4|PF13637.2|62,Ank_4|PF13637.2|6.1e+02 R_Transcript_153105:1-717(-)
NVKELPVKDKIVISNFSARFPMHGGVRVYNNTTGRFLAGKQIFPMSSGDVEAASQKLIDACLAGDTKLSLDLLADPLVDIDFVGTVNLRSRKTELVPSGESTHRVEVEYEEFKTEVTALFLASHSGNLLLVRKLLSFGADVNKKLFRGYATTAAVREGHVEILEALLKAGACQPACEEALVEASYVGRARQAELLMGSNLISQQVAVHALVTACSRGFLDVIDVLIKVSSSSPVVCRVI

Click here to download the sequence:
Link to NCBI Protein BLAST