Transcript Information: R_Transcript_153193.p1


Annotated TAIR IDAT1G31870.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303 Blast hits to 9618 proteins in 489 species: Archae - 8; Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942; Viruses - 128; Other Eukaryotes - 2334 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11437269-11439821 | Forward length=561
E-Value2.2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.20452444282279
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153193.p1 GENE.R_Transcript_153193~~R_Transcript_153193.p1 ORF type:internal len:112 (+),score=15.99 R_Transcript_153193:3-335(+)
GGCTTTTGCCAAACGGGATCTTCATCAACAACAAGGACACCTGAAGCTACTGGTTTGGCTTTCTTCTTTTTCTTCTTTTTTTTCTCCTCTTCTGGATTACTAGTACTAGTTTCATACTTCTTTAGATATTCTTTCAATGAAGTGGAAGTTGATGTGGTTGTTACCATCATTCAGTTTCAAGCTTTACTTGAATTAGGGTTTCCGGATTTCGAAAGTGAGAAGAGAGCGAGAGGCCCCTTTTGGGTGTTTGGTGAGGCTGAAATATCGGCTGAGACGGGAGGAGGTTCAAAATATTATCGGCTTTCTGAGGCCTCTTCGTGGCGGTGCTCTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153193.p1 GENE.R_Transcript_153193~~R_Transcript_153193.p1 ORF type:internal len:112 (+),score=15.99 R_Transcript_153193:3-335(+)
GFCQTGSSSTTRTPEATGLAFFFFFFFFSSSGLLVLVSYFFRYSFNEVEVDVVVTIIQFQALLELGFPDFESEKRARGPFWVFGEAEISAETGGGSKYYRLSEASSWRCSP

Click here to download the sequence:
Link to NCBI Protein BLAST