Transcript Information: R_Transcript_153228.p1


Annotated TAIR IDAT5G39570.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15844021-15845827 | Forward length=381
E-Value3E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1419290916252
Replicate 28.8912904824119
Replicate 33.623004415718
Condition 2: 8 Hour
Replicate 11.1243509414551
Replicate 20.57043065921392
Replicate 35.9270565291059
Condition 3: 24 Hour
Replicate 12.3426333905821
Replicate 21.80042929719
Replicate 32.0100953283885


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153228.p1 GENE.R_Transcript_153228~~R_Transcript_153228.p1 ORF type:internal len:196 (+),score=62.71 R_Transcript_153228:1-585(+)
CCTAGCTCTGAATATGGATCTGGGTATGGAAGGCAAAGTGAGTATGAGAATCCTAGCTCTGAATATGGATCTGGGTATGGAAGGCAAAGTGAGTATGAGAATCCTAGCTCTGAATATGGATCTGGGTATGGAAGGAAAAGTGAGTATCAGGATGCTAGCTCAGAATTTGGATCTGGGTATGGCAGGAAGAATGAGTATGAGGATGCTAGTTCTGGATATGGATCTGGTTATGGCAGAAAGAATGAGTCTTCTGAGTATGGATCTGGGTATGGCAGGAAACCTGAATATGAGGCACCTAGCTCTGAATATGGATCTGGGTATGGTAGAAAGAATGAGTCTTTTGAGTATGAAACTGGGTATGGCAGGAAACCTGAGTATGAGGCACCTAGCTCTGACTATGGGTCTGGATATGGGAGAAGGACGGAGTATGAGAACCCGACCTCGGAATATGGATCATCTGGGTATGGGAGGAGGACTGAGTATGAGAATCCAACATCTGAATATGGGTCTGGATATGGGAGGAGGACTGAGTATGAGAATCCAACATCTGAATATGGGTCTGGATATGGGAGGAGGACTGAGTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153228.p1 GENE.R_Transcript_153228~~R_Transcript_153228.p1 ORF type:internal len:196 (+),score=62.71 R_Transcript_153228:1-585(+)
PSSEYGSGYGRQSEYENPSSEYGSGYGRQSEYENPSSEYGSGYGRKSEYQDASSEFGSGYGRKNEYEDASSGYGSGYGRKNESSEYGSGYGRKPEYEAPSSEYGSGYGRKNESFEYETGYGRKPEYEAPSSDYGSGYGRRTEYENPTSEYGSSGYGRRTEYENPTSEYGSGYGRRTEYENPTSEYGSGYGRRTEY

Click here to download the sequence:
Link to NCBI Protein BLAST