Transcript Information: R_Transcript_153229.p2


Annotated TAIR IDAT5G39570.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15844021-15845827 | Forward length=381
E-Value6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 171.129251433411
Replicate 249.524905914676
Replicate 353.517534921953
Condition 2: 8 Hour
Replicate 153.363813293099
Replicate 265.378004306964
Replicate 381.885741184347
Condition 3: 24 Hour
Replicate 174.947460366675
Replicate 264.286629053252
Replicate 372.828147433533


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153229.p2 GENE.R_Transcript_153229~~R_Transcript_153229.p2 ORF type:5prime_partial len:223 (+),score=74.87 R_Transcript_153229:1-669(+)
CCTAGCTCTGAATATGGATCTGGGTATGGAAGGCAAAGTGAGTATGAGAATCCTAGCTCTGAATATGGATCTGGGTATGGAAGGCAAAGTGAGTATGAGAATCCTAGCTCTGAATATGGATCTGGGTATGGAAGGAAAAGTGAGTATCAGGATGCTAGCTCAGAATTTGGATCTGGGTATGGCAGGAAGAATGAGTATGAGGATGCTAGTTCTGGATATGGATCTGGTTATGGCAGAAAGAATGAGTCTTCTGAGTATGGATCTGGGTATGGCAGGAAACCTGAATATGAGGCACCTAGCTCTGAATATGGATCTGGGTATGGTAGAAAGAATGAGTCTTTTGAGTATGAAACTGGGTATGGCAGGAAACCTGAGTATGAGGCACCTAGCTCTGACTATGGGTCTGGATATGGGAGAAGGACGGAGTATGAGAACCCGACCTCGGAATATGGATCATCTGGGTATGGGAGGAGGACTGAGTATGAGAATCCAACATCTGAATATGGGTCTGGATATGGGAGGAGGACTGAGTATGAGGAGCCTAGTGCTGGTGGATATGGTGGGGCTTCTTATGGAAGGACTGGCTATGGTGGGAATGATGATGATGATGATAAGCCTCGTTATGGTGATGAGGGCTACGGCCGCAAGAAATATGAATCCAACATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153229.p2 GENE.R_Transcript_153229~~R_Transcript_153229.p2 ORF type:5prime_partial len:223 (+),score=74.87 R_Transcript_153229:1-669(+)
PSSEYGSGYGRQSEYENPSSEYGSGYGRQSEYENPSSEYGSGYGRKSEYQDASSEFGSGYGRKNEYEDASSGYGSGYGRKNESSEYGSGYGRKPEYEAPSSEYGSGYGRKNESFEYETGYGRKPEYEAPSSDYGSGYGRRTEYENPTSEYGSSGYGRRTEYENPTSEYGSGYGRRTEYEEPSAGGYGGASYGRTGYGGNDDDDDKPRYGDEGYGRKKYESNI*

Click here to download the sequence:
Link to NCBI Protein BLAST