Transcript Information: R_Transcript_153248.p1


Annotated TAIR IDAT3G02530.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:528806-532457 | Reverse length=535
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1111.87188592621
Replicate 276.37158992545
Replicate 396.764910219261
Condition 2: 8 Hour
Replicate 185.26573158265
Replicate 285.347515363927
Replicate 3107.48467746801
Condition 3: 24 Hour
Replicate 1140.36446250808
Replicate 2124.21027109778
Replicate 3136.19470822931


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153248.p1 GENE.R_Transcript_153248~~R_Transcript_153248.p1 ORF type:complete len:535 (+),score=142.14,Cpn60_TCP1|PF00118.20|5.6e-164 R_Transcript_153248:135-1739(+)
ATGTCACTAAGAGTACTAAACCCTAATGCCGAAGTGCTCAACAAATCAGAAGCACTTCGCATGAACATCAATGCCGCCAAGGGTTTACAGGATGTTCTCAAGACTAATCTCGGCCCCAAAGGCACCATCAAGATGCTTGTTGGTGGTGCTGGGGACATCAAGCTTACCAAAGATGGCAACACCCTTTTGAAAGAAATGCAAATCCAAAACCCAACTGCAATTATGATTGCAAGGACGGCTGTTGCCCAGGATGATATTAGTGGGGATGGAACAACATCCACAGTGATCTTCATTGGTGAGCTCATGAAGCAGGCTGACCGATACATTGATGAAGGAATGCATCCTCGTGTCTTGGTTGATGGTTTTGAGATTGCTAAAAGAGCCACTCTTCAATTTCTGGAGAAGTTTAAGACTCCTGTTGTAATGGGTGATGAGCCTGACAGAGAGATTCTTAAGATGGTTGCAAGAACAACTCTGAGGACAAAGTTGTACGAATCTCTAGCAGATCAGCTGACTGACATAGTTGTAAATTCGGTATTGTGTATTCGCAAGCCTCAGGAACCTATTGACCTATTTATGGTGGAAATTATGCATATGCGCCATAAATTTGATGTTGACACTCGACTGGTGGAGGGCATTGTTCTAGATCATGGTTCCAGGCATCCTGATATGAAGCGACGAGCTGAGGATTGTTATATACTGACTTGCAATGTATCTCTTGAGTATGAGAAGAGTGAAATAAATGCAGGTTTTTTCTACTCAAACGCAGAACAAAGGGAGGCAATGGTTGCTGCTGAGAGGCGCTCAGTTGATGAAAAAGTGAGAAAAATCATTGAGCTGAAGAATAAGGTCTGTGCAGGCACTGAAAAGAACTTTGTAGTTATCAATCAAAAAGGCATTGACCCACCTTCGCTGGATTTGCTGGCAATAGCAGGAATTATTGCCCTTCGCAGAGCAAAGAGAAGAAATATGGAAAGATTGGTGTTGGCATGTGGAGGAGAGGCTGTTAATTCAGTTGATGATTTGACGCCTGATGTCCTTGGTTGGGCTGGATTGGTCTATGAACATGTTCTTGGGGAAGAAAAGTACACATTTGTGGAAAATGTGAAGAACCCCCATTCCTGTACGATTCTTATTAAAGGTCCCAACGACCATACCATTGCACAAATAAAGGATGCTGTGCGTGATGGACTTAGAGCAGTGAAAAATACTCTTGAAGATGAAGCTGTTGTATTGGGAGCTGGGGCTTTTGAGGTTGCAGCAAGACAATACCTTGTCAATGAAGTTATGAAAACTGTGCAAGGGCGTGCCCAACTTGGTGTGGAAGCATTTGCTGATGCTCTTCTGGTGATTCCAAAGACCCTTGCTGAAAATGCTGGCCTTGACACACAAGATATCATTTCCCTCAAGGGAGAGCATGATAGAGGAAATGTCGTGGGGTTGAATCAGTACACTGGGGAGCCCATCGACCCCCAGATGGAGGGTATATTTGACAATTACTCTGTGAAGCGTCAGATCATTAACTCAGGGCCTGTTATTGCATCTCAATTGTTGTTGGTTGATGAAGTAATCCGTGCTGGGCGTAACATGAGGAAACCCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153248.p1 GENE.R_Transcript_153248~~R_Transcript_153248.p1 ORF type:complete len:535 (+),score=142.14,Cpn60_TCP1|PF00118.20|5.6e-164 R_Transcript_153248:135-1739(+)
MSLRVLNPNAEVLNKSEALRMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQADRYIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDREILKMVARTTLRTKLYESLADQLTDIVVNSVLCIRKPQEPIDLFMVEIMHMRHKFDVDTRLVEGIVLDHGSRHPDMKRRAEDCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAAERRSVDEKVRKIIELKNKVCAGTEKNFVVINQKGIDPPSLDLLAIAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDVLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTLEDEAVVLGAGAFEVAARQYLVNEVMKTVQGRAQLGVEAFADALLVIPKTLAENAGLDTQDIISLKGEHDRGNVVGLNQYTGEPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKPN*

Click here to download the sequence:
Link to NCBI Protein BLAST