Transcript Information: R_Transcript_153396.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value8.8E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3616120067028
Replicate 20.84662501678621
Replicate 31.0622075901442
Condition 2: 8 Hour
Replicate 12.6164331496048
Replicate 22.9754399224158
Replicate 34.4281146876347
Condition 3: 24 Hour
Replicate 11.8051501650816
Replicate 21.7786499105304
Replicate 32.9566052702059


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153396.p1 GENE.R_Transcript_153396~~R_Transcript_153396.p1 ORF type:complete len:496 (+),score=52.89,Pec_lyase_C|PF00544.15|4e-29,Beta_helix|PF13229.2|2.8e-07 R_Transcript_153396:369-1856(+)
ATGATCTCAAGAACCCACATTGTTGTCTTTCTTTTATGTTGCAGTTTTTTCTCTTGTTTTGTTTCTTCTTTTAATCTTACTCTCCCTCATCAACACCCTTTACCTGAAGAAATTGTTCATCAAGTTCACAGGAGAGTTAATCAATCTCTATGGAGAAGGCAAACCCTAGAAACAGAAGGCAAGGACCAGCTTACTTGTGCAACTGGTAACCCAATAGATGACTGTTGGAGATGTGACCCTAATTGGATTAACAATAGACAACATTTAGCTGATTGTGCAATTGGATTTGGCTATAAAGCTCTCGGAGGCAAAGGTGGGCCCATCTATGTGGTTACTGACCCATCTGACCCTGACCCACATAAGCCCAAACCCGGAACCCTTAGAGACGCGGTCACTAGACCAGGACCCTTATGGATTATATTCGCGAGTGACATGGTTATTAAGCTCAATTCTCCTCTAATGGTCTCAAGCTTTAAGACTATTGATGGTCGAGGAGCTCATGTAGAGGTCACTGGTGGTGGATGTATATCAATTGAGCATGTAACGAATGTTATAGTTCATAACATTTATATACATCATTGTTATCCTGCTAAGTCTGATGGTGATGGGTTACATATTTTTTCCTCTAGCAACATTTGGATTGATCATTGCTCGCTTTCGAATTGTGCTGATGGCCTAATTGATTGCACTATGGGATCAACTGCTATAACAATATCGAATTGCTTCTTTTCTCACCATGATAAGGTCATGTTGCTAGGGCATAGTGATGATCATCCTCAAGATCGTGGTATGCAGGTTACAGTTGCGTTCAATCGTTTTGGTGAGGCATTAGGACAAAGGATGCCTAGGTGTAGATTTGGTTATTTTCATGTTGTTAACAATGACTATACAAGTTGGGAAGAATATGCAGTTGGTGGGAGCTCGGCTCCTACTATCAACAGCCAAGGGAATCGTTACATTGCTCCATCAAGTCCAAATAACAAGGAGGTGACAAAGCGAATGGACACGCCGGATAACGAGTGGAAGAGCTGGAATTGGAGGACAGAAGGTGATGTAATGGTGAATGGAGCCTTCTTTGTACCCTCTGGTGAAGGAGTGAATACTCAATACACTCTTGCCTCAAGTATGGAGCCCAAATCAGCTGCTTATATTGACCAACTTACACTCAATGCTGGCCTTCTTTCAAACGGGGGCACAGGAGTGGGACTAGCCAATCCTGGTGCAGGCAGTGGTGGCGTTAGTAGTGGCGGTGGGGTAATACCTGGTGACGGTGGCGGTAATGGCTATAATAGCGGTGGTTATGGTACCGGACCACCTGGATATGGTAACGGATATTATGGCGGTGGAGATGGAGGGTGGATATTTAGCAAAGCACCCCCTCAAACCTCACACCAAACGTTTTTTTTTGTTTGGTTTAGTTATTTTGAACTTTTTGTATGTCCATTATTCAAATCCTCTCCCAATCTCATAGTTAGGCTTATAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153396.p1 GENE.R_Transcript_153396~~R_Transcript_153396.p1 ORF type:complete len:496 (+),score=52.89,Pec_lyase_C|PF00544.15|4e-29,Beta_helix|PF13229.2|2.8e-07 R_Transcript_153396:369-1856(+)
MISRTHIVVFLLCCSFFSCFVSSFNLTLPHQHPLPEEIVHQVHRRVNQSLWRRQTLETEGKDQLTCATGNPIDDCWRCDPNWINNRQHLADCAIGFGYKALGGKGGPIYVVTDPSDPDPHKPKPGTLRDAVTRPGPLWIIFASDMVIKLNSPLMVSSFKTIDGRGAHVEVTGGGCISIEHVTNVIVHNIYIHHCYPAKSDGDGLHIFSSSNIWIDHCSLSNCADGLIDCTMGSTAITISNCFFSHHDKVMLLGHSDDHPQDRGMQVTVAFNRFGEALGQRMPRCRFGYFHVVNNDYTSWEEYAVGGSSAPTINSQGNRYIAPSSPNNKEVTKRMDTPDNEWKSWNWRTEGDVMVNGAFFVPSGEGVNTQYTLASSMEPKSAAYIDQLTLNAGLLSNGGTGVGLANPGAGSGGVSSGGGVIPGDGGGNGYNSGGYGTGPPGYGNGYYGGGDGGWIFSKAPPQTSHQTFFFVWFSYFELFVCPLFKSSPNLIVRLIM*

Click here to download the sequence:
Link to NCBI Protein BLAST