Transcript Information: R_Transcript_153418.p1


Annotated TAIR IDAT1G34630.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT5G51150.1); Has 323 Blast hits to 315 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 110; Plants - 73; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12685317-12687435 | Forward length=481
E-Value9.5E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7551639176934
Replicate 22.9051484852739
Replicate 31.3686415544871
Condition 2: 8 Hour
Replicate 13.0029834369263
Replicate 22.390786108806
Replicate 32.6257046809365
Condition 3: 24 Hour
Replicate 12.5268026822945
Replicate 22.1500409610311
Replicate 32.2025363206941


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153418.p1 GENE.R_Transcript_153418~~R_Transcript_153418.p1 ORF type:5prime_partial len:318 (+),score=46.10,Tim17|PF02466.15|1.2e-05,Tim17|PF02466.15|32 R_Transcript_153418:3-956(+)
AGAATTATCTCCGCCTCCCTCAAAGGTTTCAGTATTGGAGCTGGATTGAAAGGCGGTCTCTCCCTTTTCTCTCTCCTCTCTCGCTTAACTCGCCGTCGAAGAAATTCCTCCATTCCTCTCAAGAAAGCAGGCACTTTATCTAACAGTGAGGAAATCTTATCTGTGATTAAAGAGACGTTGCGTTATGGTCTTTTTCTTGGCACGTTTGCTGGTACTTTTACATCAGTCGATGAAATCATTGCTTCTTTTGGTGGTTATCGCAGGACTGCAAGATGGAGAGCATTATTGGCAGGTGCAGTTGCAGGGCCTTCTATGCTGTTAACTGGCTTAAATACACAACACAATAGCTTGGCTATCTATATACTTATGCGAGCCGCTGTCTTGGCTTCTCGTTGTGGTATTAAGAGCAAACGTTTTGGCCGCATTTGCAAACCTTTAACTTGGTCTTATGGAGACATTTTCCTCATGTGCCTTTCTTCTTCCCAAATTTTACCTTACACTATTCTGGGGAAGAGTGTTTTTGGTATTGCTAGGTCGAGCTTGTTTCTGTCTACATACTGTGCATCTGCCTGGATGTGGACATGTATTCTTTTCAGGATTTTCAAGAGATGTAACATTCCAATGGTGGCAGCTGGGACGTTCCCAACTGGTTTGGCGTTGGCGATTGAGAAGAAGAGCAGGCGGATTGAAATATCACTCTATTGCCTTTCTCGTGCCATTGAGAGCTTCTTCACGTGCATGGCTGATGTTGGATACTTGCCTCAATCGTTGATGAATGTGAAGAGAGCTGACGTGGTGATATTTAGCTTATCCACTGCCATAATTATGCACTGCTATGAACAAGAGAGGGACGTATTCAGGTCCAAGTACCTCAATGTCCTTGACTGGGTCTTTGGTGTTCCACCACCTCCTTGTTACACTCCTCATCACAAGAAGAATTTGGAGAAACCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153418.p1 GENE.R_Transcript_153418~~R_Transcript_153418.p1 ORF type:5prime_partial len:318 (+),score=46.10,Tim17|PF02466.15|1.2e-05,Tim17|PF02466.15|32 R_Transcript_153418:3-956(+)
RIISASLKGFSIGAGLKGGLSLFSLLSRLTRRRRNSSIPLKKAGTLSNSEEILSVIKETLRYGLFLGTFAGTFTSVDEIIASFGGYRRTARWRALLAGAVAGPSMLLTGLNTQHNSLAIYILMRAAVLASRCGIKSKRFGRICKPLTWSYGDIFLMCLSSSQILPYTILGKSVFGIARSSLFLSTYCASAWMWTCILFRIFKRCNIPMVAAGTFPTGLALAIEKKSRRIEISLYCLSRAIESFFTCMADVGYLPQSLMNVKRADVVIFSLSTAIIMHCYEQERDVFRSKYLNVLDWVFGVPPPPCYTPHHKKNLEKP*

Click here to download the sequence:
Link to NCBI Protein BLAST