Transcript Information: R_Transcript_153506.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.25311312260942
Condition 2: 8 Hour
Replicate 10.13528102180799
Replicate 20.49416313461184
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.12185225906396
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153506.p1 GENE.R_Transcript_153506~~R_Transcript_153506.p1 ORF type:internal len:181 (+),score=30.30 R_Transcript_153506:2-541(+)
CTTCACACCAAAACTACATTTGTCTCTAGAGATGTCAAATTTGTTGAGCACATTTTTCCTTTTCATCCAAACACATACAACCAAATCATCCATCCTTTACCTTCTTCATATCCCAAAGTATCACCTTCAGCCTACACAGATGACTTTGTTAGCTTTGTTTCTCATTCTAGTCCTGTCACTGAGTCTTCTTCTCATTCTGAGGTTCTTACTTCTGATAATCTTCATTCCGAGTCTACTTCTCAGACTATAGTCCACCCAAGGAGGTCATCTAGACATACTCAACCGCCTAGGTGGATGCAGGATTACATTATAGCTTCCATTGTACAGGCTAGTTCTTCTTCCTCATATACATTAGAATGTTGTCTTTCCCAAGCCACAAAAGTCACTGAAACACCTTTAAAATCTTCTTTTTACTCTTTTCTTGCTTCCATCACAAACACTTCTGATCCTGAGGAGTTCATAGAAGCTGTGAAGGATCCTGAATGGTGCAAAGCTATAAATTGTGAGTTAGATGAACTGGAAAGTCAGGGGACTTGGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153506.p1 GENE.R_Transcript_153506~~R_Transcript_153506.p1 ORF type:internal len:181 (+),score=30.30 R_Transcript_153506:2-541(+)
LHTKTTFVSRDVKFVEHIFPFHPNTYNQIIHPLPSSYPKVSPSAYTDDFVSFVSHSSPVTESSSHSEVLTSDNLHSESTSQTIVHPRRSSRHTQPPRWMQDYIIASIVQASSSSSYTLECCLSQATKVTETPLKSSFYSFLASITNTSDPEEFIEAVKDPEWCKAINCELDELESQGTWV

Click here to download the sequence:
Link to NCBI Protein BLAST