Transcript Information: R_Transcript_153655.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeHomolog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.357688876577
Replicate 23.1210716835038
Replicate 34.1273401074148
Condition 2: 8 Hour
Replicate 14.5221642470137
Replicate 23.525364254241
Replicate 34.8240766964091
Condition 3: 24 Hour
Replicate 11.8614438292733
Replicate 23.1791364166598
Replicate 34.7324766890589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153655.p1 GENE.R_Transcript_153655~~R_Transcript_153655.p1 ORF type:complete len:222 (+),score=48.80,Peptidase_C14|PF00656.18|7.2e-31 R_Transcript_153655:2203-2868(+)
ATGCCAACGAAGGATAACATTGAGGATGGCTTGAGATGGCTCGTAGAGGGATGCAAATCAGGGGATTCATTGGTGTTTTACTTCTCTGGACATGGATTGCGCCAGCCTGATTTTGATAATGATGAGCTTGATGGATTTGATGAAATGTTATGCCCTGTTGATTTTAAGACCAAAGGATTAATCCTAGACAATGACATCAACACCATTATTGTTAGGCCTCTGACTAAAGGTGTAACTCTTCATGCAATTATTGATGCTTGTCACAGTGGGACCATCTGTGATCTTGAGTACTTGTATAGTTTGAAAGAGGGAAGATGGTTGGATAACAGAGCTCCTTCTGGAGCAAAAAAGTGTACAAGTGGCGGTCGTGCCATCTGTTTTAGTGCTTGTCGTGATGACCAAATGGCTGCTGACACCAATGCTTTCACAAGAAAGGGCAGAAGAGGTGTCATGACACATTGTTTCATCCATGCGATTCTGGAGAAACCTAAGTTGACATACTTTGAACTATTAAGTTCAGTGCAGGAGATCATCATTGAAACTTTTGCATCAAGATGCTTCAGTTCCAAGCTCATGGATAAGTTGTTAAACCGCAAGTTATCGCAGGAGCCACAGTTGTCTTCTTCTGAAGCTTTTGATATTGAAAACACAGAGTTCAAGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153655.p1 GENE.R_Transcript_153655~~R_Transcript_153655.p1 ORF type:complete len:222 (+),score=48.80,Peptidase_C14|PF00656.18|7.2e-31 R_Transcript_153655:2203-2868(+)
MPTKDNIEDGLRWLVEGCKSGDSLVFYFSGHGLRQPDFDNDELDGFDEMLCPVDFKTKGLILDNDINTIIVRPLTKGVTLHAIIDACHSGTICDLEYLYSLKEGRWLDNRAPSGAKKCTSGGRAICFSACRDDQMAADTNAFTRKGRRGVMTHCFIHAILEKPKLTYFELLSSVQEIIIETFASRCFSSKLMDKLLNRKLSQEPQLSSSEAFDIENTEFKL*

Click here to download the sequence:
Link to NCBI Protein BLAST