Transcript Information: R_Transcript_153657.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeHomolog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9422075434748
Replicate 21.9256961920273
Replicate 33.9985133673757
Condition 2: 8 Hour
Replicate 13.9843863079837
Replicate 25.6894551430236
Replicate 36.3906558101362
Condition 3: 24 Hour
Replicate 15.7054905536306
Replicate 23.1321077714429
Replicate 36.0871131377762


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153657.p1 GENE.R_Transcript_153657~~R_Transcript_153657.p1 ORF type:3prime_partial len:338 (+),score=59.97,Peptidase_C14|PF00656.18|1.4e-41 R_Transcript_153657:704-1714(+)
ATGAATGCAATTGTAACTCACTGCGGATATTGCAGGCTAGTGCACTTTACTACTAGAAGGACTGAAGAATTTTGCTGCTCAAGATGCCATGCCCTAATTCGAACACAAATACATGAAGTTCAAAACTATTCTACACTTCTGAAAAACACAGTCTGGAATGATTCTGAGCTGCACAAGATCAGAAGCACTACAGGATCATCAGGGTATCTGTGGAATGAAAGCCCAAAAGTTGCTCTTTCAATGTATAATGCATGTCCTAGGGGTATCTCTGGGGCAAGGCTGGGGAAGCGAGCACTGATTTGCGGGGTGAGCTACAATAAGCAGAAGTACAAGCTCAAAGGAACTCTTACTGATGTTTACAACATAAAAGACCTTCTGATGAATCAATACCATTTCCCTGAAAATGCAATTAGAGTTCTCACAGAGGAGGATGAGCCACATCGGATGCCAACGAAGGATAACATTGAGGATGGCTTGAGATGGCTCGTAGAGGGATGCAAATCAGGGGATTCATTGGTGTTTTACTTCTCTGGACATGGATTGCGCCAGCCTGATTTTGATAATGATGAGCTTGATGGATTTGATGAAATGTTATGCCCTGTTGATTTTAAGACCAAAGGATTAATCCTAGACAATGACATCAACACCATTATTGTTAGGCCTCTGACTAAAGGTGTAACTCTTCATGCAATTATTGATGCTTGTCACAGTGGGACCATCTGTGATCTTGAGTACTTGTATAGTTTGAAAGAGGGAAGATGGTTGGATAACAGAGCTCCTTCTGGAGCAAAAAAGTGTACAAGTGGCGGTCGTGCCATCTGTTTTAGTGCTTGTCGTGATGACCAAATGGCTGCTGACACCAATGCTTTCACAAGAAAGGGCAGAAGAGGTGTCATGACACATTGTTTCATCCATGCGATTCTGGAGAAACCTAAGTTGACATACTTTGAACTATTAAGTTCAGTGCAGGAGATCATCATTGAAACTTTTGCATCAAGATGCTTCAGTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153657.p1 GENE.R_Transcript_153657~~R_Transcript_153657.p1 ORF type:3prime_partial len:338 (+),score=59.97,Peptidase_C14|PF00656.18|1.4e-41 R_Transcript_153657:704-1714(+)
MNAIVTHCGYCRLVHFTTRRTEEFCCSRCHALIRTQIHEVQNYSTLLKNTVWNDSELHKIRSTTGSSGYLWNESPKVALSMYNACPRGISGARLGKRALICGVSYNKQKYKLKGTLTDVYNIKDLLMNQYHFPENAIRVLTEEDEPHRMPTKDNIEDGLRWLVEGCKSGDSLVFYFSGHGLRQPDFDNDELDGFDEMLCPVDFKTKGLILDNDINTIIVRPLTKGVTLHAIIDACHSGTICDLEYLYSLKEGRWLDNRAPSGAKKCTSGGRAICFSACRDDQMAADTNAFTRKGRRGVMTHCFIHAILEKPKLTYFELLSSVQEIIIETFASRCFSS

Click here to download the sequence:
Link to NCBI Protein BLAST