Transcript Information: R_Transcript_15379.p1


Annotated TAIR IDAT1G55310.3
Annotated Gene NameSC35-like splicing factor 33
Annotated Gene Symbol(s)SR33, SCL33, At-SCL33
Annotation TypeHomolog
Chromosome Positionchr1:20630676-20632695 | Forward length=300
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.153209531062
Replicate 28.0048395337136
Replicate 311.3102016881
Condition 2: 8 Hour
Replicate 19.3352360111372
Replicate 28.6648417134594
Replicate 311.117861504987
Condition 3: 24 Hour
Replicate 111.765876204198
Replicate 210.889784077222
Replicate 310.12306341769


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15379.p1 GENE.R_Transcript_15379~~R_Transcript_15379.p1 ORF type:complete len:160 (+),score=19.77,RRM_1|PF00076.18|3.7e-08,RRM_5|PF13893.2|8.7e-06 R_Transcript_15379:999-1478(+)
ATGAATACATTTGAGAAGACATTGAAGTCTTCTTTGGTTTCTCCAAGAGAACCTCGTGGTTTTGGATTTGTGCAATTTGTGGACCCTGCTGATGCTGCTGATGCCAAGTATGAAATGGATGGTTATGTTCTCCGTGGTCGGGAATTGACTGTAGTGTTTGCAGAGGAGAACAGGAAAAAACCATCAGAAATGAGGGCAAGAGACCGAGTAAGGGGGCGGTCTTATGATCGCAGGCGTTCCCCTCTCCGTTATTCACGATCTCCACGATATGCGAGGACTTACTCACGTAGCCCTAGTTATTCACCTAGACGTGGTTATTCAAGGGATAGGTCGTATAGAGGGCACTCATATAGAGATCGCTCTTATTCAAGATCTTCATATCGCTCACCATATGGTTCAAGGAGTCGAAGCAGAAGCCTCTATGGCAGCCGAAGCCCTAGCGGCAGCTGGCGGAGTATCACCCCTGGCTACTCTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15379.p1 GENE.R_Transcript_15379~~R_Transcript_15379.p1 ORF type:complete len:160 (+),score=19.77,RRM_1|PF00076.18|3.7e-08,RRM_5|PF13893.2|8.7e-06 R_Transcript_15379:999-1478(+)
MNTFEKTLKSSLVSPREPRGFGFVQFVDPADAADAKYEMDGYVLRGRELTVVFAEENRKKPSEMRARDRVRGRSYDRRRSPLRYSRSPRYARTYSRSPSYSPRRGYSRDRSYRGHSYRDRSYSRSSYRSPYGSRSRSRSLYGSRSPSGSWRSITPGYSR*

Click here to download the sequence:
Link to NCBI Protein BLAST