Transcript Information: R_Transcript_15380.p1


Annotated TAIR IDAT1G55310.3
Annotated Gene NameSC35-like splicing factor 33
Annotated Gene Symbol(s)SR33, SCL33, At-SCL33
Annotation TypeHomolog
Chromosome Positionchr1:20630676-20632695 | Forward length=300
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.434829650402
Replicate 210.891830840955
Replicate 39.7353634783648
Condition 2: 8 Hour
Replicate 19.4882726670575
Replicate 215.373106265815
Replicate 315.428869027329
Condition 3: 24 Hour
Replicate 112.196335089718
Replicate 212.268237757884
Replicate 318.741347138156


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15380.p1 GENE.R_Transcript_15380~~R_Transcript_15380.p1 ORF type:complete len:160 (+),score=21.92,RRM_1|PF00076.18|3.7e-08,RRM_5|PF13893.2|8.7e-06 R_Transcript_15380:999-1478(+)
ATGAATACATTTGAGAAGACATTGAAGTCTTCTTTGGTTTCTCCAAGAGAACCTCGTGGTTTTGGATTTGTGCAATTTGTGGACCCTGCTGATGCTGCTGATGCCAAGTATGAAATGGATGGTTATGTTCTCCGTGGTCGGGAATTGACTGTAGTGTTTGCAGAGGAGAACAGGAAAAAACCATCAGAAATGAGGGCAAGAGACCGAGTAAGGGGGCGGTCTTATGATCGCAGGCGTTCCCCTCTCCGTTATTCACGATCTCCACGATATGCGAGGACTTACTCACGTAGCCCTAGTTATTCACCTAGACGTGGTTATTCCAGGTCACTTTCACCTAGAGATAGGTCGTATAGAGGATGCTCTTACTCAAGATCTTCATACCGCTCACCATATGGTTCAAGGAGTCGAAGCAGAAGTCCCTATGGCAGCCGAAGCCCTAGTGGCAGCTGGCGGAGTATCACCCCTGGCTACTCTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15380.p1 GENE.R_Transcript_15380~~R_Transcript_15380.p1 ORF type:complete len:160 (+),score=21.92,RRM_1|PF00076.18|3.7e-08,RRM_5|PF13893.2|8.7e-06 R_Transcript_15380:999-1478(+)
MNTFEKTLKSSLVSPREPRGFGFVQFVDPADAADAKYEMDGYVLRGRELTVVFAEENRKKPSEMRARDRVRGRSYDRRRSPLRYSRSPRYARTYSRSPSYSPRRGYSRSLSPRDRSYRGCSYSRSSYRSPYGSRSRSRSPYGSRSPSGSWRSITPGYSR*

Click here to download the sequence:
Link to NCBI Protein BLAST