Transcript Information: R_Transcript_153804.p1


Annotated TAIR IDAT2G22070.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9383602-9385962 | Forward length=786
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44179141164287
Replicate 20.10698751804483
Replicate 30.29180557447328
Condition 2: 8 Hour
Replicate 10.21834529252321
Replicate 20.45576319676302
Replicate 30.73993826732788
Condition 3: 24 Hour
Replicate 10.64340351466177
Replicate 20.25286284078369
Replicate 30.61341337976018


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153804.p1 GENE.R_Transcript_153804~~R_Transcript_153804.p1 ORF type:complete len:785 (+),score=131.86,PPR|PF01535.16|0.026,PPR|PF01535.16|0.0058,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.00071,PPR|PF01535.16|0.0014,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|7.2,PPR|PF01535.16|0.0017,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.57,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|33,PPR|PF01535.16|0.028,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.073,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.035,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.053,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|4.4e-06,PPR_2|PF13041.2|37,PPR_2|PF13041.2|3.9e-05,PPR_2|PF13041.2|9e-08,PPR_2|PF13041.2|0.67,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|2.5e+03,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|6.9e+02,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0031,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.00098,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|3.2,DYW_deaminase|PF14432.2|3.6e-37,TPR_14|PF13428.2|8.6e+02,TPR_14|PF13428.2|4.8e+02,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|1e+04,TPR_14|PF13428.2|11,TPR_14|PF13428.2|52,TPR_14|PF13428.2|4.6e+03,TPR_14|PF13428.2|8.8e+02,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|1.5e+04 R_Transcript_153804:160-2514(+)
ATGAGCTCATACCCACATTCCTTTTCCTCTACCAGTGATCACTATGCCTCTCTGCTTCAAGCTACCCTCAAAACCAAATCACTTTTTGCCGGAAAATCAGTCCACTCTCAAATCATCAAACAAGGCCTTGTCATCAGTGTATATCTTTTGAATAATCTCCTCAATTTGTACGTCAAATGTGGGTTAATCTCCGACGCCCACCAACTGTTTGATGAACTGCCAGCCACAAATACCTTTTCTTGGAACAGCATTGTCTCAGGTTATGCTAAGGAGGGATCTTTGGGTGTTGCTCATCGTGTTTTCGAGCAAATCCCTGAACCAGATTCTGTTTCTTGGACTGCAATGATTGTGGGTTATAACCAGATGGGTTACTTTGGAAATGCAGTCAAGATGTTTCTGGATATGATTTCGAGTGGTGTTGCACCGACCCAGTTCACAGTTACTAATATTCTTGCATCCTGTGCTTACACGAAAGCGATCAGTGTTGGAAAGAAGGTTCACTCGTTTGTTGTTAAGCACGGACTTGGTAGTTATGTCGCAGTTGGGAATTCACTTCTTAATATGTATGCAAAGACCGGTGATTTTGAGAGGGCGAGGATTGTTTTTAGTAGGATGAGGGTGAGAAATGTGGCGAGCTGGAATACTATGATTTCCTTGCATATGCACTCTGGTCGTGTTGATCTTGCTCATGCTCAGTTTGAGCAAATGGCTGAACGTGACATTGTGTCTTGGAATTCTATGGTTACAGGGTACAATCAGCATGGATTTGATATCGAGGCTCTTGAAATATTCTCAAGAATGGTCAAGGATTCTTCTCTGCGTCCTGATAAGTTTACGTTGGCTAGTGCTTTATCAGCTTGTGCAAATCTTGAGAACTTGAGAGCTGGGAAACAAATCCACACTTATATGATAAGGACCAAGTTTTATATGTATGGGGCTGTTGAGAATGCTTTGATCTCAATGTACTCTAGGTGTGGAGGTGTAAAAAGTGCTCAAAAGATTATTGAGAACAATGGGGTTTCCAATCTCAATGTGATAGCATTTACAGCATTAATTGATGGGTATGTGAAGATTGGAGATATTAATCCTGCCAGAAAGCTATTTGACTCATTAAAAGATCGAGATGTAATTGTTTGGACGGCAATGATCGTAGGTTATGAGCAGAATGGCATGTATGACGATACAGTGAGGTTATTCAGATTAATGCTTAAGGAAGGACCAAGGCCAAATCATTACAGTCTAGCTGCAATGTTAAGTGTTTGTTCGAGCTTGGCTAATCTGGAGCATGGGAGACAAATCCATGGAGTTGCCATAAGGTCAGGAGAAGCTTTGTCAGTTTCTGTATGCAATGCATTAATCACGATGTATGCCAAGTCTGGAAGCATAAATAACGCTAGGCATGTTTTTAAGCTTGTCAACTGGTACAGTGATACTGTTACTTGGACTTCCATAATCATAGCTTTAGCTCAACATGGCCTAGGAGAAGAAGCGGTTGAAATGTTTGAGAAAATGCTGATGTTAGGTATAAAGCCGGACCATATAACTTATCTTGGTGTGCTTATCGCATGCACACATATTGGATTGGTAGAAAAAGGAAAAAGTTACTACAACATAATGCAAAATGTGCACAAAATTGAACCAACTCATAGCCACTATGCTTGCATGATTGACCTTCTTGGACGTGCTGGTTTACTACAAGAAGCACAAGATTTTATAGAGCAAATGCCTGTTGAACCTGACAATATTGCTTGGGGTTCATTTTTAGCATCTTGTACAGTTCATAAAAATCCAGATTTAGCGAAATTTGCAGCAGAGAGAGTGCTTCTTATCGATCCAGAGAATAGTGGGGCCTTCTCAGCCCTTGCCAATGTTAATGCGGCATGTGGAAAATGGTCAGAGGCTGCCAAAGTCAGAAAGTCGATGAAAGAAAAAGGAGTCAAGAAAGACCAAGGACTTAGTTGGCTTCAGCTCAGGGATGAAGTTCATGTCTTTGGCGTTGATGATGCTCTTCACCCTCAACGAGAAGCAATCTATGCATTGATGGCAAAAATCTGGGAGGACATCAAGAAGATGGGCTTCATCCCAGACACTGGTTCAGTGCTGCATGACCTCGATGAAGAATTAAAGGAACAAATTTTGAAGCATCATAGTGAAAAGCTTGCTATAGCATTTGGTTTACTGAATACCCCTGACAATACTACATTAAGAATTATGAAAAATTTGCGTGTCTGCAATGACTGTCATTCTGCTATCAAATTCATTTCAAAGCTAGTGGGCAGAGAAATTATACTCAGGGATGCTACACGCTTCCACCATTTCAAAGGCGGTGTTTGTTCTTGTAGGGATTTTTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153804.p1 GENE.R_Transcript_153804~~R_Transcript_153804.p1 ORF type:complete len:785 (+),score=131.86,PPR|PF01535.16|0.026,PPR|PF01535.16|0.0058,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.00071,PPR|PF01535.16|0.0014,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|7.2,PPR|PF01535.16|0.0017,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.57,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|33,PPR|PF01535.16|0.028,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.073,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.035,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.053,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|4.4e-06,PPR_2|PF13041.2|37,PPR_2|PF13041.2|3.9e-05,PPR_2|PF13041.2|9e-08,PPR_2|PF13041.2|0.67,PPR_2|PF13041.2|5.4e-09,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|2.5e+03,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|6.9e+02,PPR_1|PF12854.3|0.0046,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0031,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.00098,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|3.2,DYW_deaminase|PF14432.2|3.6e-37,TPR_14|PF13428.2|8.6e+02,TPR_14|PF13428.2|4.8e+02,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|1e+04,TPR_14|PF13428.2|11,TPR_14|PF13428.2|52,TPR_14|PF13428.2|4.6e+03,TPR_14|PF13428.2|8.8e+02,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|1.5e+04 R_Transcript_153804:160-2514(+)
MSSYPHSFSSTSDHYASLLQATLKTKSLFAGKSVHSQIIKQGLVISVYLLNNLLNLYVKCGLISDAHQLFDELPATNTFSWNSIVSGYAKEGSLGVAHRVFEQIPEPDSVSWTAMIVGYNQMGYFGNAVKMFLDMISSGVAPTQFTVTNILASCAYTKAISVGKKVHSFVVKHGLGSYVAVGNSLLNMYAKTGDFERARIVFSRMRVRNVASWNTMISLHMHSGRVDLAHAQFEQMAERDIVSWNSMVTGYNQHGFDIEALEIFSRMVKDSSLRPDKFTLASALSACANLENLRAGKQIHTYMIRTKFYMYGAVENALISMYSRCGGVKSAQKIIENNGVSNLNVIAFTALIDGYVKIGDINPARKLFDSLKDRDVIVWTAMIVGYEQNGMYDDTVRLFRLMLKEGPRPNHYSLAAMLSVCSSLANLEHGRQIHGVAIRSGEALSVSVCNALITMYAKSGSINNARHVFKLVNWYSDTVTWTSIIIALAQHGLGEEAVEMFEKMLMLGIKPDHITYLGVLIACTHIGLVEKGKSYYNIMQNVHKIEPTHSHYACMIDLLGRAGLLQEAQDFIEQMPVEPDNIAWGSFLASCTVHKNPDLAKFAAERVLLIDPENSGAFSALANVNAACGKWSEAAKVRKSMKEKGVKKDQGLSWLQLRDEVHVFGVDDALHPQREAIYALMAKIWEDIKKMGFIPDTGSVLHDLDEELKEQILKHHSEKLAIAFGLLNTPDNTTLRIMKNLRVCNDCHSAIKFISKLVGREIILRDATRFHHFKGGVCSCRDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST