Transcript Information: R_Transcript_15381.p2


Annotated TAIR IDAT3G13570.1
Annotated Gene NameSC35-like splicing factor 30A
Annotated Gene Symbol(s)SCL30A, At-SCL30A
Annotation TypeOrtholog
Chromosome Positionchr3:4429564-4431602 | Reverse length=262
E-Value2.9E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2308187643388
Replicate 23.7543053724506
Replicate 33.6408059755474
Condition 2: 8 Hour
Replicate 13.5674770121814
Replicate 28.144692061359
Replicate 35.409420383559
Condition 3: 24 Hour
Replicate 15.169307587695
Replicate 25.6963913690895
Replicate 35.218260720055


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15381.p2 GENE.R_Transcript_15381~~R_Transcript_15381.p2 ORF type:5prime_partial len:151 (+),score=13.47,RRM_1|PF00076.18|1.2e-06 R_Transcript_15381:3-455(+)
CAAAGAACCTTCTCGATGATCACCGAAAGAAAGAGAGAGAAAATAAAAGACCAAACGGCAAACGCCTACGGAAAGCGTCATTCATTCTTTCATTCCAACAATATTTTTTTTCCCTGTGCATCTGCGTGGCTGAAAACAAATACCATCTTGTTCGTTCTAGAGAGAGAAAGAGAGAGAGAGATTCCCTGTTTCTCGTTCTCCGTTTCAAGAAGGAAGATGAGGGGAAGAAGTTACAGCTACAGCCCTTCGCCACCAAGGGGTTATGGGAGAAGATACAGGAGCCCTTCTCCGAGGGTTCGTTATAGTCGTGGAAAGGAGCCACCTACAAGTTTGTTGGTGCGGAACCTCCGTCATGATTGCAGGCCTGAAGATCTGCGAGGGCCATTTGGTCAGTTTGGTCCAATCAAAGACATTTACTTGCCAAGAGATTATTACACTGGTGTCAAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15381.p2 GENE.R_Transcript_15381~~R_Transcript_15381.p2 ORF type:5prime_partial len:151 (+),score=13.47,RRM_1|PF00076.18|1.2e-06 R_Transcript_15381:3-455(+)
QRTFSMITERKREKIKDQTANAYGKRHSFFHSNNIFFPCASAWLKTNTILFVLEREREREIPCFSFSVSRRKMRGRSYSYSPSPPRGYGRRYRSPSPRVRYSRGKEPPTSLLVRNLRHDCRPEDLRGPFGQFGPIKDIYLPRDYYTGVKD*

Click here to download the sequence:
Link to NCBI Protein BLAST