Transcript Information: R_Transcript_153936.p1


Annotated TAIR IDAT3G22800.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8063063-8064475 | Reverse length=470
E-Value1.6E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91391737742681
Replicate 20.46723338895795
Replicate 30.57346491895792
Condition 2: 8 Hour
Replicate 10.57894256481665
Replicate 20.99519919181911
Replicate 31.1108078821934
Condition 3: 24 Hour
Replicate 10.89404534405524
Replicate 20.70552288523404
Replicate 31.4003260300379


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153936.p1 GENE.R_Transcript_153936~~R_Transcript_153936.p1 ORF type:5prime_partial len:719 (+),score=97.53,PPR|PF01535.16|89,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.11,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.8,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|8.1e-05,PPR|PF01535.16|8.8e-08,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0055,PPR|PF01535.16|0.31,PPR|PF01535.16|1.8e+02,PPR_2|PF13041.2|9.1e-06,PPR_2|PF13041.2|9.7,PPR_2|PF13041.2|6.9e-05,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|2,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1e+03,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|86,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.79,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|5.2,PPR_1|PF12854.3|78,PPR_1|PF12854.3|4.1e-05,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|21,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|34,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|80,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|31,PPR_3|PF13812.2|85,PPR_3|PF13812.2|7.6e+02 R_Transcript_153936:3-2159(+)
CCGCCCCCCAACCCCCCCACCCCCCCCCCCGCGCCCCCCGCTCCCCCCCCCCCCCCCCTCACCCACCCCCCCCCCCTCCAACCCCCACCCCCCCCCCCACCCCCTCTCCCCCCCACCCCCCCCCCCCTCCCTCCCCTGTCCTCGATGAATTTAGGAAGACACAACATACCTTCTGCCATCCAATCAGCACTGAACCACAAATTTCAACCCACAATCAACTCTTCAATCTTAGAAACCCTTTTGTCAAAATGCCAAAACTTACCCCAATTCAATCAAATCCTCTCTCAGATGATCTCCACCAGCTTCCTCAAAGACACATACGCAGCCAGCAGAATCCTTAAGTTCGCCACTGGTTCATCCTTCATCAGTCTTGATTACTCTCGTCGAATCTTTAATAGTATCGAATACCCAAATGGCTTCATTTGGAATACCATGATGAAAGCCTGTCTATTGCCCAATTCCAACGACAATGTCGTGAGCATGTATAAAACGATGTTACATTGTAGTGTTATTCCAGATAATTATACTTATCCAATCTTGATTCAAGCTTGTGCCTTACAGTTTTCAGTCATAGAAGGAAAACAGATTCATGGTCATGCTTTGAAGATGGGTTTTGACTCTGATGTTTATGTGCGGAACACATTGATTAATATGTATGGGGTTTGTGGTGATTTGTGTCGTGCGCGCCAAGTGTTCGATGAAAGTCCTGTGTTGGATCTGGTTTCATGGAATTCGATCTTGGCTGGGTATGTCCAGAAGGAAGATTTGGAAAAGGCTAAAGAGATATATAGTCTAATGCCTGAAAAGAATATAATTGCTTCAAATTCTATGATTGTTTTGTTGGGTAGGTTGGGCTGTGTTGGTGAAGCACGCCAACTGTTCGATAGAATGCCTCAGAAGGATGTGGTTTCATGGAGTGCCTTGATTTCATGCTATGAGCAAAATGAATTGTACCAAGAGGGTCTAGTTGTGTTTAAAGAAATGCTGGCTAATGGAATTGTGGTGGATGAAGTTGTGCTTCTAAGCGTTCTTTCAGCATGTGCCCACTTGTCTGCGTTTCAGGAAGGGAGACTACTTCATGGGTTGACTGTCAAAATTGGGATTGATTCTTATGTTAATCTACAGAATGCGTGCATTCACTTGTATGCTGAATGTGGGGATATAATGGCTGCTGAGGAACTATTTGATAGTAGCTATAAGTTGGACCAGATATCTTGGAACTCGATGATATCTGGGTACATGAAATGCGGGTTTGTTGATAGGGCTAGGTCATTGTTTGAGATCATTCCAGAGAAGGATGTTGTCTCTTGGAGTGCAATGATATCTGGCTATGCTCAGCATAACCTCTTCTCTGAGACCTTGGCGCTATTTCGAGACATGTGTCAGCAAGATATTAGGCCTGATGAAACTGCATTGGTGAGCTTGGTTTCAGCCTGCGGACACTTGGGTGCACTAGATCAAGGCAAGTGGGTACATTCGTACATAAGAAACAATGAGCTGAAAATTGATGTCATTCTTGGTACTACTCTAATAGACATGTACATGAAATGCGGATGTGTGGAGAATGCACTCGAGGTGTTTTATAACATGGAACATAAGGGCGTTTCTACTTGGAATGCTCTCATCCTTGGGTTTTCAATGAATGGATTGACTGAGAGGGCACTTGAGATGTTCTCAGAGATGAAGACATGTGGAGTGATTCCAAATGAGATAACTTTTATTGGGGTTCTTGGTGCTTGTAGACACATGGGATTAGTGAATGAGGGTCGTTACCAATTCAATTCAATGGTGACAGAACACAAAATTGAGCCCAATGTTAAGCACTATGGATGTATGGTTGACTTGCTTGGTCGGGCAGGTTTACTCAAGGAAGCAGAGGAACTCATCATCAGTATGCGCATGGAACCTGATGTGGTTTCATGGGGAGCACTGATAGGTGCATGTATAAAGCACGGTGACAATGAAATGGGAGAAAGGGTGGGAAGGAAGCTCGTTGAGCTGCAGCCTGATAACGACGGGTTTCATGTAATATTGTCCAATTTACGTGCTTCCAAAGGTGATTGGAATGATGTACTAGAGATCCGACAGAAAATGACACATCATGGAGTCGAAAAAACACCAGGCCGCAGCTTAGTTGAAGCCAATTGCTATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153936.p1 GENE.R_Transcript_153936~~R_Transcript_153936.p1 ORF type:5prime_partial len:719 (+),score=97.53,PPR|PF01535.16|89,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.11,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.8,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|8.1e-05,PPR|PF01535.16|8.8e-08,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0055,PPR|PF01535.16|0.31,PPR|PF01535.16|1.8e+02,PPR_2|PF13041.2|9.1e-06,PPR_2|PF13041.2|9.7,PPR_2|PF13041.2|6.9e-05,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|2,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1e+03,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|86,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.79,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|5.2,PPR_1|PF12854.3|78,PPR_1|PF12854.3|4.1e-05,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.0032,PPR_1|PF12854.3|21,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|34,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|80,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|31,PPR_3|PF13812.2|85,PPR_3|PF13812.2|7.6e+02 R_Transcript_153936:3-2159(+)
PPPNPPTPPPAPPAPPPPPLTHPPPLQPPPPPPPPLPPTPPPLPPLSSMNLGRHNIPSAIQSALNHKFQPTINSSILETLLSKCQNLPQFNQILSQMISTSFLKDTYAASRILKFATGSSFISLDYSRRIFNSIEYPNGFIWNTMMKACLLPNSNDNVVSMYKTMLHCSVIPDNYTYPILIQACALQFSVIEGKQIHGHALKMGFDSDVYVRNTLINMYGVCGDLCRARQVFDESPVLDLVSWNSILAGYVQKEDLEKAKEIYSLMPEKNIIASNSMIVLLGRLGCVGEARQLFDRMPQKDVVSWSALISCYEQNELYQEGLVVFKEMLANGIVVDEVVLLSVLSACAHLSAFQEGRLLHGLTVKIGIDSYVNLQNACIHLYAECGDIMAAEELFDSSYKLDQISWNSMISGYMKCGFVDRARSLFEIIPEKDVVSWSAMISGYAQHNLFSETLALFRDMCQQDIRPDETALVSLVSACGHLGALDQGKWVHSYIRNNELKIDVILGTTLIDMYMKCGCVENALEVFYNMEHKGVSTWNALILGFSMNGLTERALEMFSEMKTCGVIPNEITFIGVLGACRHMGLVNEGRYQFNSMVTEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIISMRMEPDVVSWGALIGACIKHGDNEMGERVGRKLVELQPDNDGFHVILSNLRASKGDWNDVLEIRQKMTHHGVEKTPGRSLVEANCYS*

Click here to download the sequence:
Link to NCBI Protein BLAST