Transcript Information: R_Transcript_154010.p1


Annotated TAIR IDAT1G62930.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23306534-23308423 | Forward length=629
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0421601591198
Replicate 21.0650297312615
Replicate 30.82995426073016
Condition 2: 8 Hour
Replicate 10.88716901982773
Replicate 20.81017687830383
Replicate 31.5784009235119
Condition 3: 24 Hour
Replicate 11.8299701413387
Replicate 21.1187450161887
Replicate 30.79303277851077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154010.p1 GENE.R_Transcript_154010~~R_Transcript_154010.p1 ORF type:5prime_partial len:138 (+),score=32.80,PPR_2|PF13041.2|1.9e-17,PPR_2|PF13041.2|5.6e-16,PPR_2|PF13041.2|5.1e-08,PPR_1|PF12854.3|3.8e-09,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|6.1e-05,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|5.8e-10,PPR|PF01535.16|0.00034,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|1.5e-06,PPR_3|PF13812.2|1.9,MRP-S27|PF10037.5|1.3e-05 R_Transcript_154010:3-416(+)
AAGGATCTTGTGAGCTATAATGTGTTAATTGATGGTATGTGTGAAAAAGGGAGATGGAAAGAGGCATTGGAAGTCTTCTCCAAGCTGATGGCCAAGGGATTGCAGCTAAATTGTATAACGTACACTGCAATGATCAAAGGGCTTTGTAAGAAGGGGCTCTTAGATCAAGCTCATGCATTATTGAAGAAGATGGAAGAGCATGGTTGTTTTCCAAATGATGCTACCTACAATACCATTATTTGGGGGTTCCTTTGCAAAAACCAAATCACAAAAGCTCTCCAGCTTATTGAAGTTATGACTAGCAGAGGTTTTGAAGCAGATACTGAAACTTTGTCTCTATTCCTTGACTTGCTTCATGATGATCGTGTAGACAAGTCGGTCAAGGAACAGCTTCAGAAATTTTTGAAGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154010.p1 GENE.R_Transcript_154010~~R_Transcript_154010.p1 ORF type:5prime_partial len:138 (+),score=32.80,PPR_2|PF13041.2|1.9e-17,PPR_2|PF13041.2|5.6e-16,PPR_2|PF13041.2|5.1e-08,PPR_1|PF12854.3|3.8e-09,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|6.1e-05,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|5.8e-10,PPR|PF01535.16|0.00034,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|1.5e-06,PPR_3|PF13812.2|1.9,MRP-S27|PF10037.5|1.3e-05 R_Transcript_154010:3-416(+)
KDLVSYNVLIDGMCEKGRWKEALEVFSKLMAKGLQLNCITYTAMIKGLCKKGLLDQAHALLKKMEEHGCFPNDATYNTIIWGFLCKNQITKALQLIEVMTSRGFEADTETLSLFLDLLHDDRVDKSVKEQLQKFLKH*

Click here to download the sequence:
Link to NCBI Protein BLAST