Transcript Information: R_Transcript_15406.p1


Annotated TAIR IDAT1G29930.1
Annotated Gene Namechlorophyll A/B binding protein 1
Annotated Gene Symbol(s)CAB1, AB140, CAB140, LHCB1.3
Annotation TypeOrtholog
Chromosome Positionchr1:10478071-10478874 | Forward length=267
E-Value4.4E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 175.293463938215
Replicate 27.3210784346302
Replicate 320.646204280743
Condition 2: 8 Hour
Replicate 16.6047398870859
Replicate 24.11910981285
Replicate 35.0155766187911
Condition 3: 24 Hour
Replicate 110.87475079207
Replicate 27.4001197593384
Replicate 39.9358659433942


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15406.p1 GENE.R_Transcript_15406~~R_Transcript_15406.p1 ORF type:3prime_partial len:152 (+),score=23.72,Chloroa_b-bind|PF00504.17|4e-23 R_Transcript_15406:84-536(+)
ATGGCTGCATCTACAATGGGCCTCTCATCACCCTCTCTTGCCGGAAAGGCTGTCAAGCTTGGCCCAACCTCCTCCGAAATCCTCGGAGAGGGTCGGATCACCATGCGGAAGGCCGCCGGCAAGGCCAAGCCCATTTCATCTGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCGTCCTACCTCACCGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCTGGGCTTTCAGCTGACCCTGAAACCTTCGCTAAAAACCGTGAGCTTGAGGTGATCCATTGTAGATGGGCCATGTTGGGTGCTTTGGGCTGTGTTTTCCCCGAGCTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCCGTTTGGTTCAAGGCCGGAGCCCAAATCTTTAGCGAAGGTGGGCTTGACTACTTGGGTAACCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15406.p1 GENE.R_Transcript_15406~~R_Transcript_15406.p1 ORF type:3prime_partial len:152 (+),score=23.72,Chloroa_b-bind|PF00504.17|4e-23 R_Transcript_15406:84-536(+)
MAASTMGLSSPSLAGKAVKLGPTSSEILGEGRITMRKAAGKAKPISSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP

Click here to download the sequence:
Link to NCBI Protein BLAST