Transcript Information: R_Transcript_154194.p1


Annotated TAIR IDAT5G65820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26339876-26341789 | Reverse length=637
E-Value4.5E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6698892386067
Replicate 26.4431395170625
Replicate 39.0577786830587
Condition 2: 8 Hour
Replicate 15.4205349883215
Replicate 25.8035876534375
Replicate 38.0643033443246
Condition 3: 24 Hour
Replicate 18.9027221921173
Replicate 25.185511250609
Replicate 310.191984625197


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154194.p1 GENE.R_Transcript_154194~~R_Transcript_154194.p1 ORF type:complete len:655 (+),score=132.12,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|9.1e-08,PPR_2|PF13041.2|0.0064,PPR_2|PF13041.2|4.6e-18,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|3.8e-14,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.00016,PPR|PF01535.16|0.033,PPR|PF01535.16|0.0036,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|0.0035,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|55,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0032,PPR|PF01535.16|2.6,PPR|PF01535.16|0.08,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|4.6e-10,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|5.3e-08,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0097,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1e+02,MRP-S27|PF10037.5|2.4e-05,MRP-S27|PF10037.5|9.2e+02,MRP-S27|PF10037.5|24,MRP-S27|PF10037.5|58 R_Transcript_154194:249-2213(+)
ATGCGTAGGCTGTCCTTAAAATTATTCTCTCTCTACAATAATTGTCACCCTTCTTTGGTGACCACAGAATCCCTTGCTCAAACAATCCTCACTGCCAATTTTTCAAACCTATCAGCCACTCATAACATTAAACCTTCTAATCGCTCTCCCAATATAAACCCTAATTCTAATGTTGATCGGAAAAGTGGGTTTGGATTTGTACAATTAGATAGTAACCCTCAAAACATGACCCATGATCGTAACTTTGATGAATTTGAGGTGGATGTTGAGAAAATCTATCGAATTTTAAGGAAGTTCCACTCTAGGGTTCCAAAATTGGAACTTGCTTTACAAGAATCTGGGATGGTTATGAGGTCTGGTTTGACCGAACGCGTGTTGAATCGATGTGGGGATGCTGGGAATTTGGCTTATAGGTTTTTTATATGGGCATCTAAGCAACCTGGTTATAGGCATAGCTTTGATGTGTATAAGGCTATGATAAGGGCTTTAGGGAAAATGAGACAATTTGGGGCGGTTTGGGCCATAATAGAGGAAATGCGGAGAGAGAATCCGCTATTGATTACTCCTGATGTGTTTGTGGTGCTGATGAGGAGGTTTGCATCAGCTAGGATGGTGAAGAAGGCGGTCGAGGTTTTAGATGAAATGCCTAAATATGGGTGTGAACCTGATGATTATGTGTTTGGGTGTTTGTTGGATGCATTGTGTAAGAATGGTAATGTAAAGGAAGCAGCCTCGCTGTTTGAGGATATGAGAATGAGATTTCCACCTACGATAAAGCATTTTACTTCGTTGTTGTATGGATGGTGCAAGGAAGGGAAACTTATGGAAGCTAAGTTTGTGTTGGTTCAAATGAGACAAGCAGGGTTTGAACCTGACATTGTGGTCTATAATAATTTGCTTAATGGGTATGCAGTTGCTGGGAAGATGGCGGATGCGTATGATCTCTTGCAAGAGATGAGGAGGAAGGGTTGTGAGCCAAATGCAGCATCCTATACTGTATTGATCCAGGCGCTTTGTAGTATGGAGAAGACTGAGGAAGGCATGAGGGTCTTTGTGGATATGGAAAGAAGTGGTTGTGATGCTGATGTTGTGACTTATAATGCCCTTATTAGTGGACTATGCAAGTGGCGCAAGATTGATAAAGCTTATCAGCTTTTGGATTCTATGCTACAGAGAGGACATAGTCCTGATCAAACTACCTATCTACATATACTTCTAGCTCATGAGAAGAAGGAAGAATTTGAACAGTGTGTGGAACTTGTGGAAGGGATGAGGAAGATCAATTGCTTTCCAGATACTAAGATATACAATACCTTGATCCGTTTAGCATACAAGCTTGGAGAGGTGAAAGAGGGCGTTCGACTATGGAACGAGATGGAGGCAAGTAGGCTTAGTCCTGGACTAGATAGCTTCACTATAATGGTTCATGGCCTTATTGAGCAGGATTGTCTGGTTGAAGCTTGTGACTATTTCAAGGAAATGGTTGCTAGAGGTCTTTTGTCTGCTCCTCGATATGGTACTTTGAAGGATTTATTGAATTCTCTACTACGAGATGACAAACTTGAGTTAGCTAAAGATGTGTGGGATTGTATCATAAAAAAGGGATGTGACTTGAATGTTTATGCATGGACAATTTGGATACATGCACTCTTTTCAAATAAGCATGTGAAAGAGGCTTGCTCTTATTGTTTGGAAATGATGGATGCAGATTTGATGCCACAACCTAGCACTTTTGCAAAGCTGATGAAGGGCTTAAGGAAACTGTACAACAGACAAATTGCTGCAGAGATTACGGAAAAAGTGAGAAAGATGGCAGCAGATAGACAGATTACCTTCAAAATGTACAAACGTAGGGGAGAGAGAGACTTGAAGGAGAAAGCTAAGGCTAAAATTGATGGAAGGAAAAGGCGGGCTAGACGACGCCGTTGGGGTGGAGGTCGTAGTAAAGCTGATCTTGTGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154194.p1 GENE.R_Transcript_154194~~R_Transcript_154194.p1 ORF type:complete len:655 (+),score=132.12,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|9.1e-08,PPR_2|PF13041.2|0.0064,PPR_2|PF13041.2|4.6e-18,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|3.8e-14,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.00016,PPR|PF01535.16|0.033,PPR|PF01535.16|0.0036,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|0.0035,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|55,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0032,PPR|PF01535.16|2.6,PPR|PF01535.16|0.08,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|4.6e-10,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|5.3e-08,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0097,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1e+02,MRP-S27|PF10037.5|2.4e-05,MRP-S27|PF10037.5|9.2e+02,MRP-S27|PF10037.5|24,MRP-S27|PF10037.5|58 R_Transcript_154194:249-2213(+)
MRRLSLKLFSLYNNCHPSLVTTESLAQTILTANFSNLSATHNIKPSNRSPNINPNSNVDRKSGFGFVQLDSNPQNMTHDRNFDEFEVDVEKIYRILRKFHSRVPKLELALQESGMVMRSGLTERVLNRCGDAGNLAYRFFIWASKQPGYRHSFDVYKAMIRALGKMRQFGAVWAIIEEMRRENPLLITPDVFVVLMRRFASARMVKKAVEVLDEMPKYGCEPDDYVFGCLLDALCKNGNVKEAASLFEDMRMRFPPTIKHFTSLLYGWCKEGKLMEAKFVLVQMRQAGFEPDIVVYNNLLNGYAVAGKMADAYDLLQEMRRKGCEPNAASYTVLIQALCSMEKTEEGMRVFVDMERSGCDADVVTYNALISGLCKWRKIDKAYQLLDSMLQRGHSPDQTTYLHILLAHEKKEEFEQCVELVEGMRKINCFPDTKIYNTLIRLAYKLGEVKEGVRLWNEMEASRLSPGLDSFTIMVHGLIEQDCLVEACDYFKEMVARGLLSAPRYGTLKDLLNSLLRDDKLELAKDVWDCIIKKGCDLNVYAWTIWIHALFSNKHVKEACSYCLEMMDADLMPQPSTFAKLMKGLRKLYNRQIAAEITEKVRKMAADRQITFKMYKRRGERDLKEKAKAKIDGRKRRARRRRWGGGRSKADLVI*

Click here to download the sequence:
Link to NCBI Protein BLAST