Transcript Information: R_Transcript_154195.p1


Annotated TAIR IDAT5G65820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26339876-26341789 | Reverse length=637
E-Value4.7E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67946724366127
Replicate 20
Replicate 30.77518570545355
Condition 2: 8 Hour
Replicate 10.20715621782779
Replicate 20.15134268589635
Replicate 30
Condition 3: 24 Hour
Replicate 10.6992225551585
Replicate 20.33586688665854
Replicate 30.33331529980047


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154195.p1 GENE.R_Transcript_154195~~R_Transcript_154195.p1 ORF type:complete len:591 (+),score=120.62,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|7.9e-08,PPR_2|PF13041.2|0.0056,PPR_2|PF13041.2|4e-18,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|3.4e-14,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|9e-09,PPR_2|PF13041.2|0.039,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0032,PPR|PF01535.16|5.2e-06,PPR|PF01535.16|0.0031,PPR|PF01535.16|6e-08,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|49,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.0028,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|4.1e-10,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|4.7e-08,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|0.0074,PPR_1|PF12854.3|1e+02,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|8.2e+02,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|3.9e+02,MRP-S27|PF10037.5|2.1e-05,MRP-S27|PF10037.5|8.1e+02,MRP-S27|PF10037.5|21 R_Transcript_154195:249-2021(+)
ATGCGTAGGCTGTCCTTAAAATTATTCTCTCTCTACAATAATTGTCACCCTTCTTTGGTGACCACAGAATCCCTTGCTCAAACAATCCTCACTGCCAATTTTTCAAACCTATCAGCCACTCATAACATTAAACCTTCTAATCGCTCTCCCAATATAAACCCTAATTCTAATGTTGATCGGAAAAGTGGGTTTGGATTTGTACAATTAGATAGTAACCCTCAAAACATGACCCATGATCGTAACTTTGATGAATTTGAGGTGGATGTTGAGAAAATCTATCGAATTTTAAGGAAGTTCCACTCTAGGGTTCCAAAATTGGAACTTGCTTTACAAGAATCTGGGATGGTTATGAGGTCTGGTTTGACCGAACGCGTGTTGAATCGATGTGGGGATGCTGGGAATTTGGCTTATAGGTTTTTTATATGGGCATCTAAGCAACCTGGTTATAGGCATAGCTTTGATGTGTATAAGGCTATGATAAGGGCTTTAGGGAAAATGAGACAATTTGGGGCGGTTTGGGCCATAATAGAGGAAATGCGGAGAGAGAATCCGCTATTGATTACTCCTGATGTGTTTGTGGTGCTGATGAGGAGGTTTGCATCAGCTAGGATGGTGAAGAAGGCGGTCGAGGTTTTAGATGAAATGCCTAAATATGGGTGTGAACCTGATGATTATGTGTTTGGGTGTTTGTTGGATGCATTGTGTAAGAATGGTAATGTAAAGGAAGCAGCCTCGCTGTTTGAGGATATGAGAATGAGATTTCCACCTACGATAAAGCATTTTACTTCGTTGTTGTATGGATGGTGCAAGGAAGGGAAACTTATGGAAGCTAAGTTTGTGTTGGTTCAAATGAGACAAGCAGGGTTTGAACCTGACATTGTGGTCTATAATAATTTGCTTAATGGGTATGCAGTTGCTGGGAAGATGGCGGATGCGTATGATCTCTTGCAAGAGATGAGGAGGAAGGGTTGTGAGCCAAATGCAGCATCCTATACTGTATTGATCCAGGCGCTTTGTAGTATGGAGAAGACTGAGGAAGGCATGAGGGTCTTTGTGGATATGGAAAGAAGTGGTTGTGATGCTGATGTTGTGACTTATAATGCCCTTATTAGTGGACTATGCAAGTGGCGCAAGATTGATAAAGCTTATCAGCTTTTGGATTCTATGCTACAGAGAGGACATAGTCCTGATCAAACTACCTATCTACATATACTTCTAGCTCATGAGAAGAAGGAAGAATTTGAACAGTGTGTGGAACTTGTGGAAGGGATGAGGAAGATCAATTGCTTTCCAGATACTAAGATATACAATACCTTGATCCGTTTAGCATACAAGCTTGGAGAGGTGAAAGAGGGCGTTCGACTATGGAACGAGATGGAGGCAAGTAGGCTTAGTCCTGGACTAGATAGCTTCACTATAATGGTTCATGGCCTTATTGAGCAGGATTGTCTGGTTGAAGCTTGTGACTATTTCAAGGAAATGGTTGCTAGAGGTCTTTTGTCTGCTCCTCGATATGATTTGATGCCACAACCTAGCACTTTTGCAAAGCTGATGAAGGGCTTAAGGAAACTGTACAACAGACAAATTGCTGCAGAGATTACGGAAAAAGTGAGAAAGATGGCAGCAGATAGACAGATTACCTTCAAAATGTACAAACGTAGGGGAGAGAGAGACTTGAAGGAGAAAGCTAAGGCTAAAATTGATGGAAGGAAAAGGCGGGCTAGACGACGCCGTTGGGGTGGAGGTCGTAGTAAAGCTGATCTTGTGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154195.p1 GENE.R_Transcript_154195~~R_Transcript_154195.p1 ORF type:complete len:591 (+),score=120.62,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|7.9e-08,PPR_2|PF13041.2|0.0056,PPR_2|PF13041.2|4e-18,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|3.4e-14,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|9e-09,PPR_2|PF13041.2|0.039,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0032,PPR|PF01535.16|5.2e-06,PPR|PF01535.16|0.0031,PPR|PF01535.16|6e-08,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|49,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.0028,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|4.1e-10,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|4.7e-08,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|0.0074,PPR_1|PF12854.3|1e+02,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|8.2e+02,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|3.9e+02,MRP-S27|PF10037.5|2.1e-05,MRP-S27|PF10037.5|8.1e+02,MRP-S27|PF10037.5|21 R_Transcript_154195:249-2021(+)
MRRLSLKLFSLYNNCHPSLVTTESLAQTILTANFSNLSATHNIKPSNRSPNINPNSNVDRKSGFGFVQLDSNPQNMTHDRNFDEFEVDVEKIYRILRKFHSRVPKLELALQESGMVMRSGLTERVLNRCGDAGNLAYRFFIWASKQPGYRHSFDVYKAMIRALGKMRQFGAVWAIIEEMRRENPLLITPDVFVVLMRRFASARMVKKAVEVLDEMPKYGCEPDDYVFGCLLDALCKNGNVKEAASLFEDMRMRFPPTIKHFTSLLYGWCKEGKLMEAKFVLVQMRQAGFEPDIVVYNNLLNGYAVAGKMADAYDLLQEMRRKGCEPNAASYTVLIQALCSMEKTEEGMRVFVDMERSGCDADVVTYNALISGLCKWRKIDKAYQLLDSMLQRGHSPDQTTYLHILLAHEKKEEFEQCVELVEGMRKINCFPDTKIYNTLIRLAYKLGEVKEGVRLWNEMEASRLSPGLDSFTIMVHGLIEQDCLVEACDYFKEMVARGLLSAPRYDLMPQPSTFAKLMKGLRKLYNRQIAAEITEKVRKMAADRQITFKMYKRRGERDLKEKAKAKIDGRKRRARRRRWGGGRSKADLVI*

Click here to download the sequence:
Link to NCBI Protein BLAST