Transcript Information: R_Transcript_154397.p1


Annotated TAIR IDAT5G60820.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24469636-24470895 | Forward length=419
E-Value2.7E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4547085421863
Replicate 21.6652238261202
Replicate 31.8957300079574
Condition 2: 8 Hour
Replicate 10.92877418765413
Replicate 21.4650232930432
Replicate 31.439610497479
Condition 3: 24 Hour
Replicate 12.2957807227704
Replicate 22.8899994408343
Replicate 33.1699434374127


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154397.p1 GENE.R_Transcript_154397~~R_Transcript_154397.p1 ORF type:complete len:290 (+),score=37.08,zf-RING_2|PF13639.2|8.5,zf-RING_2|PF13639.2|1e-13,zf-RING_11|PF17123.1|7.9e+03,zf-RING_11|PF17123.1|5e-09,zf-C3HC4_2|PF13923.2|3.3e+02,zf-C3HC4_2|PF13923.2|1.1e-06,zf-C3HC4|PF00097.21|6.2e+02,zf-C3HC4|PF00097.21|2e-06,zf-rbx1|PF12678.3|5.2e+03,zf-rbx1|PF12678.3|2.2e-06 R_Transcript_154397:75-944(+)
ATGTCTTTGAGGCCAAGAGTGGTCGTTGATGGAGTTCGAAGAACTCGAACCTATCGCTTCTTCTGGTGCCGCCATTGTGATCGAACAGTCAGGATTTCGTCTACCCTTTCCCCAACACCACATAACTTTGTTTGCCCTTTATGTTACAACCACTTATGCCAAGAACTCCATCATCATAATCAAGTCGCAAGGCCTGAATCATCAACAGCTGCACAGCTGCTAGACACCATGGTTCAGCTGCTGGCTGACTCACCACGCCGACCAACTGTCAGTACCAGAATTTTACGACAAACCACACCAGTGTTGACCCCACCAATACCCGTCTCACCACCAGAGCACGCGCTTTCTTGGGTGGCTAATCAGGATCCCCCGTCTGCCCCTACTGCATCGTCTGCACCAGAATGTGCACCAGTTGTCAGAATGACAGCAAGTATGTTGCACCAGGAACCTTCGTGTCCTGTATGTAAGGAAGAGTTTGTGGTCGGTGAAGAAATCAGAGCAACTCCTTGCAGTCATTTCTACCATTCTGATTGCATTCTTCCTTGGCTTCAGACTCACAACACTTGTCCCGTCTGTCGCTTCCAACTTCCTATCCCTCGACCAACTCCTTCCAGTTCAATCAATACTGATAATGGTGGCGGATTTCAGAGCCGTGCAGATATTGATGACGATGATTTTAATGAGAATTTCCGGTTTGAGGATGTTCTGAACCTCAACTGGCCTACCTGGGCCGAGCTCCTCTCTTTGTGGCCTTTTCGGTTTGGGTCCTTCTTCAACCGGACCTTTCAAGATCATGATCATGGTTCGCTTAATAACACTCCTTCAAGTAGATCAGCATTGTCCTGGTGGCGCTTCCTGAGAGTTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154397.p1 GENE.R_Transcript_154397~~R_Transcript_154397.p1 ORF type:complete len:290 (+),score=37.08,zf-RING_2|PF13639.2|8.5,zf-RING_2|PF13639.2|1e-13,zf-RING_11|PF17123.1|7.9e+03,zf-RING_11|PF17123.1|5e-09,zf-C3HC4_2|PF13923.2|3.3e+02,zf-C3HC4_2|PF13923.2|1.1e-06,zf-C3HC4|PF00097.21|6.2e+02,zf-C3HC4|PF00097.21|2e-06,zf-rbx1|PF12678.3|5.2e+03,zf-rbx1|PF12678.3|2.2e-06 R_Transcript_154397:75-944(+)
MSLRPRVVVDGVRRTRTYRFFWCRHCDRTVRISSTLSPTPHNFVCPLCYNHLCQELHHHNQVARPESSTAAQLLDTMVQLLADSPRRPTVSTRILRQTTPVLTPPIPVSPPEHALSWVANQDPPSAPTASSAPECAPVVRMTASMLHQEPSCPVCKEEFVVGEEIRATPCSHFYHSDCILPWLQTHNTCPVCRFQLPIPRPTPSSSINTDNGGGFQSRADIDDDDFNENFRFEDVLNLNWPTWAELLSLWPFRFGSFFNRTFQDHDHGSLNNTPSSRSALSWWRFLRVL*

Click here to download the sequence:
Link to NCBI Protein BLAST