Transcript Information: R_Transcript_154519.p1


Annotated TAIR IDAT3G47833.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17648721-17649829 | Forward length=93
E-Value1.1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1129.75680015479
Replicate 2153.50145019377
Replicate 3158.32947126045
Condition 2: 8 Hour
Replicate 1117.35453407359
Replicate 2134.74458850414
Replicate 3134.20905883571
Condition 3: 24 Hour
Replicate 1129.18227279423
Replicate 2130.38886214585
Replicate 3116.3563990091


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154519.p1 GENE.R_Transcript_154519~~R_Transcript_154519.p1 ORF type:5prime_partial len:193 (+),score=13.10 R_Transcript_154519:3-581(+)
GCCCGAAAAAATAAAAATAAAAAAAAAGGGGAAGAAAAACTCGAAAAAAACATTCTGCAGTCTTCTCCTCTCTCCAGTCCGGTCCGGTTGGAGTTTCCATCAAACTGCCCCCAAATCCCAATAATTCATCTCACCATTGTGGTTGGCACACGCACTTACAGTCAGACTCACTCCTTTCTCTTTCCCCTACCCCGATTTTCACCTCTTTCTCTCTCTCCTTGTCTGTCTCTGTGTGTTTCGATCTCAAGACCCAGACTGAAAGTCGCAAAACCTAATCTAATGGCATCATTTCTCAGTGGCAAAACCTCCCTCTTCTCCCAGCTTCGATCTAATCCTCAGAGAACGCAAAACGTTTTAGCCCAACAGACGCGAGGGTTTCACGTCGACCTTGGAGAGCGCGAGAAAGCTCTGTTGGCAAAGGACCCTGCACTGAGTCGGTTCAAGTCATATAAGAGTGGTGTGAAGCGAATCAAAAGACTTGGCGATGTTCTCACAATTATTGTTGTGGCTGGCTGCTGCTATGAAATCTATGTCAGGGCGACAATGCGAGAGGAATTGAGGAAACAAGAAAAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154519.p1 GENE.R_Transcript_154519~~R_Transcript_154519.p1 ORF type:5prime_partial len:193 (+),score=13.10 R_Transcript_154519:3-581(+)
ARKNKNKKKGEEKLEKNILQSSPLSSPVRLEFPSNCPQIPIIHLTIVVGTRTYSQTHSFLFPLPRFSPLSLSPCLSLCVSISRPRLKVAKPNLMASFLSGKTSLFSQLRSNPQRTQNVLAQQTRGFHVDLGEREKALLAKDPALSRFKSYKSGVKRIKRLGDVLTIIVVAGCCYEIYVRATMREELRKQEKS*

Click here to download the sequence:
Link to NCBI Protein BLAST