Transcript Information: R_Transcript_154630.p1


Annotated TAIR IDAT5G50175.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20428143-20428481 | Forward length=112
E-Value2.5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.490900299929
Replicate 222.278517235614
Replicate 323.256458780826
Condition 2: 8 Hour
Replicate 112.523304973019
Replicate 27.681218953079
Replicate 34.1568573939817
Condition 3: 24 Hour
Replicate 114.721036695627
Replicate 214.815746430311
Replicate 38.8553309038592


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154630.p1 GENE.R_Transcript_154630~~R_Transcript_154630.p1 ORF type:complete len:131 (+),score=15.75 R_Transcript_154630:178-570(+)
ATGAACACAATTAGTAGAAAACCAACATTTACTAATACTACTATTAGCATACTTGTCTTTCTCTTCCTTGTATCCTACACTCACTTCTTCTATTCCTCTTCTTCCTGCAGCTCCGCTCTATGGACCACCCTTCTCGCGTTGGCAGGGCTTTCACTAGCAGCAGTATGCCTGGCTGTTGTCGCGCGGACCACAATGGTGGCATGGATCACAGTCCTTGTCCTGCTGGCCTTCAAGGGAAAACGACGACGTGTTCTGGCTCATCAAGGGAAGAAGATCACTGCTGATGTTGCCATGGACCTTATCAAGGTCTTGCTCATGGAACGACGGTTTGTTACAGTTATTTGTGCTACTGCTGTTAGTATTATGGCCATGGCTCAAATAACAAGATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154630.p1 GENE.R_Transcript_154630~~R_Transcript_154630.p1 ORF type:complete len:131 (+),score=15.75 R_Transcript_154630:178-570(+)
MNTISRKPTFTNTTISILVFLFLVSYTHFFYSSSSCSSALWTTLLALAGLSLAAVCLAVVARTTMVAWITVLVLLAFKGKRRRVLAHQGKKITADVAMDLIKVLLMERRFVTVICATAVSIMAMAQITRF*

Click here to download the sequence:
Link to NCBI Protein BLAST