Transcript Information: R_Transcript_154631.p1


Annotated TAIR IDAT5G50175.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20428143-20428481 | Forward length=112
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9174771076488
Replicate 29.9371803496983
Replicate 38.7430296168521
Condition 2: 8 Hour
Replicate 14.485959990335
Replicate 23.4138750902573
Replicate 33.1869240020527
Condition 3: 24 Hour
Replicate 17.1852679109608
Replicate 212.627056616743
Replicate 35.5136966005161


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154631.p1 GENE.R_Transcript_154631~~R_Transcript_154631.p1 ORF type:complete len:131 (+),score=18.95 R_Transcript_154631:178-570(+)
ATGAATGCAAGAAGTAGAAAACCAACATTTACTACTACTACTACTGCTAGCATACTTGTCTTTCTCTTCCTTGTATCCTACACTCACTTCTTCTATTCCTCTTCTTCCTGCAGCTCCGCTCTATGGACCACCCTTCTCGCGTTGGCAGGGCTTTCACTAGCAGCAGTATGCCTGGCTGTTGTCGCGCGGACCACAATGGTGGCATGGATCACAGTGCTTGTCCTGCTGACCTTCAAGGGAAAACGACATGTTCTGGCTCATCAAGGGAAGAAGATCACTGCTGATGTTGCCATGGACCTTATCAAGGTCTTGCTCATGGAACGACGGTTTGTTACAGTTATTTGTGCTACTGCTGTTAGTATTATGGCCATGGCTCAAATAACAAGATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154631.p1 GENE.R_Transcript_154631~~R_Transcript_154631.p1 ORF type:complete len:131 (+),score=18.95 R_Transcript_154631:178-570(+)
MNARSRKPTFTTTTTASILVFLFLVSYTHFFYSSSSCSSALWTTLLALAGLSLAAVCLAVVARTTMVAWITVLVLLTFKGKRHVLAHQGKKITADVAMDLIKVLLMERRFVTVICATAVSIMAMAQITRF*

Click here to download the sequence:
Link to NCBI Protein BLAST