Transcript Information: R_Transcript_154725.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6053092696332
Replicate 21.2994453026373
Replicate 31.1938364870959
Condition 2: 8 Hour
Replicate 11.8344459080998
Replicate 20.94687773268864
Replicate 31.3007668848486
Condition 3: 24 Hour
Replicate 11.3460603586276
Replicate 21.5805071517678
Replicate 32.3527500152039


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154725.p1 GENE.R_Transcript_154725~~R_Transcript_154725.p1 ORF type:5prime_partial len:307 (-),score=39.58,RVT_2|PF07727.10|3.7e-10 R_Transcript_154725:11-931(-)
CATGCAAAGAACGTGCCACCACGGTTTTGGGCCGAATGTATGAAAACGGCGGCCCATGTCATCAATAGGTTACCACAAGCAAGGCTAGACTTCATCTCTCCTTATGAGATGCTTTGGAAGACCAAGCCCACGGTAAGTCATTTTAGAGTCTTTGGGTGTGTTTGCTACGTATTTGTAGAGGATCATTTACGTAGCAAGTTCGACAAGAAAGCTATTCGTTGCATATTCGTGGGCTATGACAACGAAAGAAAGGGGTGGAGATGTTGTGACCCCACAACCGGTCGTTGCTATGTATCAAGGAATGTCGTATTCGACGAAACATCATCATGGTGGTCTTCTCAAACCGTACTTCTTCCAGACTCTAAGGAGATAGAAGAGAAGCTACAACAGAAACTGGAAATACAACCAGAAACCTCCAATGTTCAACCAACACAAGGAAATGCACCAGAGATCGAGCGACAAGAAGAAGATACTAAAGAGAGCACGTCAAACAAAGAAAAGAGCCCATGGCAAACTGGAGTACATCGTTCAACCCTCGAAGAAGAAAGGTCAAGCCAACTTGAAGATACTCTGGAAAAAGAAGTTCAGGAGCCGCAACCGAGGCGTTATCCTCAAAGAACTAGGAAGCCAAATCCTAAGTATGCAAATGCAGCCTTGGTTGAAGATATCGAGGAACCATGGACCTACGAAGAAGCATCAAGGAGTAAAGAATGGAGAAAAGCCATGGAGGAAGAGATGAAGGCTCTAATCCAAAACGAGACATGGGAGTTGGTTCCTAAGCCCGAGGACATCAAACCCATCTCGTGCAAATGGGTTTACAAGTTAAAGGTACGTCCCGAAGGCTCCATTGATAGAAACAAAGCTAGATTGATGATCTCAACGAAAGCAAAGTTGAAGCATTTCGAAAGAAGCTCGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154725.p1 GENE.R_Transcript_154725~~R_Transcript_154725.p1 ORF type:5prime_partial len:307 (-),score=39.58,RVT_2|PF07727.10|3.7e-10 R_Transcript_154725:11-931(-)
HAKNVPPRFWAECMKTAAHVINRLPQARLDFISPYEMLWKTKPTVSHFRVFGCVCYVFVEDHLRSKFDKKAIRCIFVGYDNERKGWRCCDPTTGRCYVSRNVVFDETSSWWSSQTVLLPDSKEIEEKLQQKLEIQPETSNVQPTQGNAPEIERQEEDTKESTSNKEKSPWQTGVHRSTLEEERSSQLEDTLEKEVQEPQPRRYPQRTRKPNPKYANAALVEDIEEPWTYEEASRSKEWRKAMEEEMKALIQNETWELVPKPEDIKPISCKWVYKLKVRPEGSIDRNKARLMISTKAKLKHFERSSV*

Click here to download the sequence:
Link to NCBI Protein BLAST