Transcript Information: R_Transcript_154819.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0843203182396
Replicate 28.1038352483957
Replicate 32.0093629470309
Condition 2: 8 Hour
Replicate 11.2887297340655
Replicate 20.78459234530476
Replicate 30.63689861825919
Condition 3: 24 Hour
Replicate 10.40276854785446
Replicate 20.19346718325068
Replicate 30.38399481906837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154819.p1 GENE.R_Transcript_154819~~R_Transcript_154819.p1 ORF type:complete len:114 (+),score=51.41,HMG_box|PF00505.15|3.3e-26,HMG_box_2|PF09011.6|1.5e-18 R_Transcript_154819:21-362(+)
ATGCCAAAGAAAGCAGCAGCAAAAGATACCAAGAAGAAGACCACCACCAAGAAGAAAAAAGACCCAAATGCACCAAAGAGAGCACTCTCTGCATACATGTTCTACTCTAAGGAGAAGAGACCTGTTTTGAAGGAGGAAGAGCCAACTCTCAAGTTCGGAGAAATCGCAAAGAAGCTCGGGCAAATGTGGAAGGATTTGGATGAGGAAGAGAAGAAGCCATACGTCCAACAAGCTGAAGAAGACAAGGAGAGATATAAGAAAGAAAAGGAAGAGTACGACAGCAAGCAAGACGAGAGAGGTGATGATGACGAAGACAACGAAGATGAAGATGATGATGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154819.p1 GENE.R_Transcript_154819~~R_Transcript_154819.p1 ORF type:complete len:114 (+),score=51.41,HMG_box|PF00505.15|3.3e-26,HMG_box_2|PF09011.6|1.5e-18 R_Transcript_154819:21-362(+)
MPKKAAAKDTKKKTTTKKKKDPNAPKRALSAYMFYSKEKRPVLKEEEPTLKFGEIAKKLGQMWKDLDEEEKKPYVQQAEEDKERYKKEKEEYDSKQDERGDDDEDNEDEDDDE*

Click here to download the sequence:
Link to NCBI Protein BLAST