Transcript Information: R_Transcript_154869.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.168189501102
Replicate 22.183615243295
Replicate 32.1990468092306
Condition 2: 8 Hour
Replicate 16.2683814264948
Replicate 20
Replicate 35.2276638586715
Condition 3: 24 Hour
Replicate 14.7752239033625
Replicate 26.8812407738601
Replicate 34.0273376623891


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154869.p1 GENE.R_Transcript_154869~~R_Transcript_154869.p1 ORF type:complete len:125 (+),score=11.52 R_Transcript_154869:236-610(+)
ATGAGGGTTTATGATTCTTTTACTGCTTGGATCAACAGCTTCCTTGCTTGTATGGGGGGCTGTCTGGGACATGATGGGAAACAAGCACGTGGTCATCCAGTAGATGGTACACGACGCCAGGGACTAGTAGAGAAACTCAGTTTCTCGGAAGATTTTTGGGGCACCAGCACTGGAGATTTAGACATTCCTCCTGGTCTTTCACAAAGAAATGTTTCTTCACTCAGTACTTCAAACCTGAGTTTCTACTCGGATCTAGGATCTGCGAGCACAAACTCCCATAATGAATTCGTAAATCATGGCAAGTCTACATATTCCCGTCTCTCTGGACTCTCTATATGTAAATATGTACAGAATCAGCTCTTTATTTTGACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154869.p1 GENE.R_Transcript_154869~~R_Transcript_154869.p1 ORF type:complete len:125 (+),score=11.52 R_Transcript_154869:236-610(+)
MRVYDSFTAWINSFLACMGGCLGHDGKQARGHPVDGTRRQGLVEKLSFSEDFWGTSTGDLDIPPGLSQRNVSSLSTSNLSFYSDLGSASTNSHNEFVNHGKSTYSRLSGLSICKYVQNQLFILT*

Click here to download the sequence:
Link to NCBI Protein BLAST