Transcript Information: R_Transcript_154876.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6918861689137
Replicate 24.4992072320639
Replicate 38.5445767223743
Condition 2: 8 Hour
Replicate 10
Replicate 24.4366829049971
Replicate 35.1861744629677
Condition 3: 24 Hour
Replicate 11.4576385541399
Replicate 20
Replicate 32.084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_154876.p1 GENE.R_Transcript_154876~~R_Transcript_154876.p1 ORF type:3prime_partial len:126 (+),score=15.75,DUF4050|PF13259.2|2.6e-08 R_Transcript_154876:236-610(+)
ATGAGGGTTTATGATTCTTTTACTGCTTGGATCAACAGCTTCCTTGCTTGTATGGGGGGCTGTCTGGGACATGATGGGAAACAAGCACGTGGTCATCCAGTAGATGGTACACGACGCCAGGGACTAGTAGAGAAACTCAGTTTCTCGGAAGATTTTTGGGGCACCAGCACTGGAGATTTAGACATTCCTCCTGGTCTTTCACAAAGAAATGTTTCTTCACTCAGTACTTCAAACCTGAGTTTCTACTCGGATCTAGGATCTGCGAGCACAAACTCCCATAATGAATTCGTAAATCATGGTCTTCTTCTCTGGAATCAAATTCGTCTTCAGTGGATTGGAGCCACAAAGTCTTCGCTTCAGCATCATCAAACAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_154876.p1 GENE.R_Transcript_154876~~R_Transcript_154876.p1 ORF type:3prime_partial len:126 (+),score=15.75,DUF4050|PF13259.2|2.6e-08 R_Transcript_154876:236-610(+)
MRVYDSFTAWINSFLACMGGCLGHDGKQARGHPVDGTRRQGLVEKLSFSEDFWGTSTGDLDIPPGLSQRNVSSLSTSNLSFYSDLGSASTNSHNEFVNHGLLLWNQIRLQWIGATKSSLQHHQTR

Click here to download the sequence:
Link to NCBI Protein BLAST