Transcript Information: R_Transcript_15490.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeOrtholog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value8.3E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.848568694659
Replicate 222.819508575696
Replicate 325.601647901582
Condition 2: 8 Hour
Replicate 121.330823525471
Replicate 226.432190859889
Replicate 331.320426168511
Condition 3: 24 Hour
Replicate 126.687647057415
Replicate 225.267789597328
Replicate 325.014519642168


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15490.p1 GENE.R_Transcript_15490~~R_Transcript_15490.p1 ORF type:complete len:357 (+),score=49.01,Peptidase_C14|PF00656.18|6.8e-61,zf-LSD1|PF06943.8|2.9e-11 R_Transcript_15490:258-1328(+)
ATGTTGATGCTGGTAGACTGCTCCAATTGCCGGACCCCACTACAGCTGCCACCTGGCGCCCGATCCATCCGCTGCGCCGTCTGTCAGGCCATTACCCAAATTACCCCTGACCCACGCGCCATCCCTCCTCCTAGCGCAACCCACGCGCCTCCCCCTCCTTCTCCCTACTCTCACGCGCCGCCGGGCCCTCCGCCCTCCCCTCATGGCCGGAAAAAGGCTGTCGTTTGTGGGATTTCTTATAAGTTCTCCAGACATGAGCTTAAAGGGTGTATAAATGATGCCAAGTGTATGAGATATTTGTTGATTAATAAATTTCACTTTCCCTCTGATTCCATCATCATGCTTACTGAGGAAGAAACTGATCCATACAAGATTCCTTCAAAGCACAATATTAGGATGGCACTCTATTGGCTTGTAGCAGGCTGTCAGCCAGGGGACTCCCTGGTGTTTCACTATTCTGGCCATGGTTCACGGCAGAGGAATTATAATGGTGATGAAGTTGATGGATATGATGAAACTCTGTGCCCTTTGGACTTTGAAACACAGGGGATGATTGTTGATGATGAAATAAATGCAGCGATAGTCAGACCTCTTCCACGTGGGGTTAAGCTTCATGCCATAATAGATGCTTGTCACAGTGGCACTGTACTGGACTTACCATTCCTTTGCAGGATGAACAGGTCTGGTCAGTATGTTTGGGAGGATCATCGCCCTCAGTCAGGCACATGGAAAGGAACCAGTGGTGGTGAAGTCATCTCATTTAGTGGCTGCGATGATGACCAAACCTCCGCTGATACAGCTGCTCTGTCAAAAATTACTTCAACAGGGGCCATGACGTATTGTTTTATCCAAGCAATTGAACGTGGACAAGCTAGTACTTATGGGAGCATGCTAAATTCCATGCGTACAGCTATTCGAGGCACTGGTGGGAACTCTGGTGGCGATATTGGCATTACATCCCTTTTATCCATGCTAGTCACTGGAGGCAGCTTAAGTGGGGGGCTCACACAGGAGCCCCAATTGACCTCTTGTGAGCCATTTGACGTGTATATGAAACCCTTCTCGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15490.p1 GENE.R_Transcript_15490~~R_Transcript_15490.p1 ORF type:complete len:357 (+),score=49.01,Peptidase_C14|PF00656.18|6.8e-61,zf-LSD1|PF06943.8|2.9e-11 R_Transcript_15490:258-1328(+)
MLMLVDCSNCRTPLQLPPGARSIRCAVCQAITQITPDPRAIPPPSATHAPPPPSPYSHAPPGPPPSPHGRKKAVVCGISYKFSRHELKGCINDAKCMRYLLINKFHFPSDSIIMLTEEETDPYKIPSKHNIRMALYWLVAGCQPGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVDDEINAAIVRPLPRGVKLHAIIDACHSGTVLDLPFLCRMNRSGQYVWEDHRPQSGTWKGTSGGEVISFSGCDDDQTSADTAALSKITSTGAMTYCFIQAIERGQASTYGSMLNSMRTAIRGTGGNSGGDIGITSLLSMLVTGGSLSGGLTQEPQLTSCEPFDVYMKPFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST