Transcript Information: R_Transcript_155031.p1


Annotated TAIR IDAT4G17750.1
Annotated Gene Nameheat shock factor 1
Annotated Gene Symbol(s)HSF1, HSFA1A, ATHSF1, ATHSFA1A
Annotation TypeOrtholog
Chromosome Positionchr4:9869969-9871603 | Reverse length=495
E-Value5.4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1317326662445
Replicate 21.9923496745392
Replicate 33.8456566767263
Condition 2: 8 Hour
Replicate 13.3958498831946
Replicate 26.2022883939055
Replicate 36.2934416384553
Condition 3: 24 Hour
Replicate 14.6083189690647
Replicate 22.4953030131675
Replicate 34.9526923014147


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155031.p1 GENE.R_Transcript_155031~~R_Transcript_155031.p1 ORF type:5prime_partial len:274 (+),score=12.46,HSF_DNA-bind|PF00447.13|1.7e-22 R_Transcript_155031:3-824(+)
AATCCTACCGTCTTCGCTCGCGATTTGCTCCCTCGCTACTTCAAGCACAACAACTTCTCCTCCTTCGTCCGCCAACTCAACACCTACGGATTTCGGAAGGTGGTACCGGACCGGTGGGAGTTCCTGAACGAGTCGTTTCGGAGAGGCGAGAAACGGCTGCTCTGCGAAATACAACGTCGAAAAACGACGACGACATCGGCGGCGCAACGGCAGGTGTCTCCAACGACGGATTCGGCGGAGGAGCAGGTGATCTCAAATTCTCCGCCATTAGGAATTCCGAGCTCCGTATTATGTAATCCTAGCAACAACAACAACAATAATAACATTAGTAGCAGTGGGAGTAGCAACGATAGAGTAGATTTGATGGACGAGAACGACAGATTAAAGAGAGAGAACTTGCAGCTAAATAGAGAATTGACCAACATGAAAACGTTATGTAACAATATCTTCGCTTTGATGTCGAATTTCACCACGTCTCAGGCTACTGTCACCAGTAGCAGCACCAATGCTGTCAAACAGGCGCTCGATTTGCTGCCACGTGTTAGTCATCCTGACGGGGAGGATGTTTGCGTCACAGTCGCCGACCCGAACCCAAGCCCGAAGCTGTTTGGTGTACCGATTGGAATGAAGCGGGTTAGAGAAGGGGGTGAGGAAGGGGAAGGTGAGGGTATGGTGCAGGTGCAGGGTGATACCATGGAGATCGATACAGAGGTAAAACCAGAGCCCTACGATGGAGAGGTAAGAAATGATACCAACAATCAAGAGTCACCGTGGCTCGCTAGATGGTCCAAAACTGCCACGTCTTCAGCTGTTCATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155031.p1 GENE.R_Transcript_155031~~R_Transcript_155031.p1 ORF type:5prime_partial len:274 (+),score=12.46,HSF_DNA-bind|PF00447.13|1.7e-22 R_Transcript_155031:3-824(+)
NPTVFARDLLPRYFKHNNFSSFVRQLNTYGFRKVVPDRWEFLNESFRRGEKRLLCEIQRRKTTTTSAAQRQVSPTTDSAEEQVISNSPPLGIPSSVLCNPSNNNNNNNISSSGSSNDRVDLMDENDRLKRENLQLNRELTNMKTLCNNIFALMSNFTTSQATVTSSSTNAVKQALDLLPRVSHPDGEDVCVTVADPNPSPKLFGVPIGMKRVREGGEEGEGEGMVQVQGDTMEIDTEVKPEPYDGEVRNDTNNQESPWLARWSKTATSSAVHN*

Click here to download the sequence:
Link to NCBI Protein BLAST