Transcript Information: R_Transcript_155125.p1


Annotated TAIR IDAT5G47360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19214445-19215878 | Reverse length=477
E-Value9.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7699840925788
Replicate 21.4421701296043
Replicate 31.4808396021755
Condition 2: 8 Hour
Replicate 11.8302565718143
Replicate 21.7165929494243
Replicate 32.1635253062684
Condition 3: 24 Hour
Replicate 12.8291439209898
Replicate 22.0495796140739
Replicate 32.7414902840154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155125.p1 GENE.R_Transcript_155125~~R_Transcript_155125.p1 ORF type:complete len:495 (+),score=59.99,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|5.1e-12,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|4.8e-16,PPR_2|PF13041.2|0.23,PPR_2|PF13041.2|1.6e-06,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|3.4,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|5.3e-07,PPR_1|PF12854.3|6.8e-10,PPR_1|PF12854.3|2.9e-08,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|24,PPR_1|PF12854.3|60,PPR_1|PF12854.3|86,PPR|PF01535.16|7.7,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|0.0017,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5.4e-07,PPR|PF01535.16|0.062,PPR|PF01535.16|0.34,PPR|PF01535.16|7.1e+02,PPR|PF01535.16|20,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|0.0009,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|5,PPR_3|PF13812.2|37 R_Transcript_155125:252-1736(+)
ATGGCTGCTGTTTTTGCAATCTCTCGGTTTTTAGTTATAACTCGCTCAACCTCATTTCGATTCTTCAAGAACCCTTCTTTTTCATTCACAACAAGACCCACTTCATTAAATAATGCAGAAAAGTTTTACACCCACTTGTTAAAACATCCCCAAAACCCTGAAAAAACCCTTTCTTCTTGTATAAGTGGGGCTCAATTTCAATTGGATGCCCAATGTGTTATTCATGTGTTAAATAGATGTTGCTCCTTTAATGATAAACCCCAATTCCAATTGGGTCTTCGTTTTTTCATATGGGCTGGTCTTCAATCTAACTATAAGCATAGTAAGCATATGTATAACCTTGCTTGTAAGTTGTTTGAAATCCCTCAAAATCCCTCTAGGATTAGGGACCTCTTTGAGGTGTATAGACTTGAAGGTTGTGCAACTAATAATGTTAAATTGTTTAAGGTTGTTTTGAACTTGTGTAAACAAGCTATGATTCCTGATGAAGCTTTGTGGGTTTTGAGAAGTATGGAGGAATTTCGATGTAAGCCGGATTCGACCATTTTTAATGTTGTTATTAGGTTGTTTTGTGAAAAGGGTGATCTTGATATGGCAATGGAGTTGATGAGGGAAATGGAAGTAAAATATGAATTGTATCCTGATATGATTACTTATATGGCATTGCTTAAGGGTTTTTGCAATGCTGGTAGATTGGCTGATGCTTGTATGTTGATTAAGGCAATGAGAAATCACCAGTGTACGCCTAATTTAGTGGTGTATTCGGCCCTCCTTTATGGGTTTTGTAGGTTTGGGAGTTTAGATAGGGCATTGGAGTTGTTAGGGGAAATGGAGAAAGAAGGTGGTGGTGAATGTACACCCAATGTGATTACTTATACTTCAGTGATACAAAGCTTTTGTGAAAAGGGCAAGTCAATCGAGGCATTATCCATATTAGATCGTATGAAGAAATTCGAGTGCTCCCCTAATCGAGTGACTATAAGCGTGTTAATCGAGGGACTTTGTGCTCAAGGACACATTGATGAGGCCCATAAACTAGTGGATAGGCTTGTTGCAGGAGATGATGTTTCAAGTAGTGATTGCTATAGTTCTCTTGTGATCTCTCTATCGAGGATCAAAAGATTTGAGGAGGCTGAGAAGCTTTTGAAGTGGATGTTTGATAGTCAAGTGAGGCCTGATGCGGTGGCTAGTAGCATTTTAATGAGGAATCTATGTATGCAGGAGAGATTTCTTGATGCATTTAATCTATGTGAAGCTATTGACAAGACCAATTGCACAGTGACAATGGATTCTGATTTATATTCCCTCCTACTTGCTGGCCTTTGTCAACAAAACCATAAGGATGAAGTCACAATATTAGCGAGTTTAATGGTTGACAAAGGGATTCAGCTCAAAACGCCCCTTGTCCATTCCATTAATCACTACCTAAACGAATCCATAGACATGGAGACACTTTCGAACTTGTACAAGTTAAAGAGTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155125.p1 GENE.R_Transcript_155125~~R_Transcript_155125.p1 ORF type:complete len:495 (+),score=59.99,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|5.1e-12,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|4.8e-16,PPR_2|PF13041.2|0.23,PPR_2|PF13041.2|1.6e-06,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|3.4,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|5.3e-07,PPR_1|PF12854.3|6.8e-10,PPR_1|PF12854.3|2.9e-08,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|24,PPR_1|PF12854.3|60,PPR_1|PF12854.3|86,PPR|PF01535.16|7.7,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|0.0017,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|5.4e-07,PPR|PF01535.16|0.062,PPR|PF01535.16|0.34,PPR|PF01535.16|7.1e+02,PPR|PF01535.16|20,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|0.0009,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|5,PPR_3|PF13812.2|37 R_Transcript_155125:252-1736(+)
MAAVFAISRFLVITRSTSFRFFKNPSFSFTTRPTSLNNAEKFYTHLLKHPQNPEKTLSSCISGAQFQLDAQCVIHVLNRCCSFNDKPQFQLGLRFFIWAGLQSNYKHSKHMYNLACKLFEIPQNPSRIRDLFEVYRLEGCATNNVKLFKVVLNLCKQAMIPDEALWVLRSMEEFRCKPDSTIFNVVIRLFCEKGDLDMAMELMREMEVKYELYPDMITYMALLKGFCNAGRLADACMLIKAMRNHQCTPNLVVYSALLYGFCRFGSLDRALELLGEMEKEGGGECTPNVITYTSVIQSFCEKGKSIEALSILDRMKKFECSPNRVTISVLIEGLCAQGHIDEAHKLVDRLVAGDDVSSSDCYSSLVISLSRIKRFEEAEKLLKWMFDSQVRPDAVASSILMRNLCMQERFLDAFNLCEAIDKTNCTVTMDSDLYSLLLAGLCQQNHKDEVTILASLMVDKGIQLKTPLVHSINHYLNESIDMETLSNLYKLKSC*

Click here to download the sequence:
Link to NCBI Protein BLAST