Transcript Information: R_Transcript_155173.p1


Annotated TAIR IDAT1G77170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28998133-28999536 | Reverse length=467
E-Value1.9E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6489019349851
Replicate 20.92630737130727
Replicate 31.1549615594699
Condition 2: 8 Hour
Replicate 10.97737696217995
Replicate 21.033486135517
Replicate 31.2202763442277
Condition 3: 24 Hour
Replicate 12.6526878099238
Replicate 22.177725142557
Replicate 33.2647626738859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155173.p1 GENE.R_Transcript_155173~~R_Transcript_155173.p1 ORF type:complete len:476 (+),score=89.85,PPR|PF01535.16|0.29,PPR|PF01535.16|0.062,PPR|PF01535.16|0.023,PPR|PF01535.16|7.3e+02,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|9.9e-06,PPR|PF01535.16|0.23,PPR|PF01535.16|0.0087,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.1,PPR_2|PF13041.2|0.007,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|30,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|0.094,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|4.1e+02,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|6.5e+02 R_Transcript_155173:79-1506(+)
ATGATCTCCTTCCCCATTCTACATGTAAGGCTCCACAAACTGCCACTACACAAATCCTCCATTCTCTCACACAAATTCAATGCTCTCCTCCCACAAAACCCTGAATCGAATCAAAACTCTACACCCAATCAAACACCATCACAAACCCTCCAACAAAATCAAGGAGAGACCATTGCAAACTTGCTATCAAACTGCTCCAATCTTCCCCAGCTCCGTCAAATACATGCCCACATCATCAGAAACCACTTCTTAGAATTCAACAACGCCCCATTTCATTGGAACAACATTATACGTGCATACACTAGACTAAACTCACCATGCCAAGCTTTCTTAGTTTACTTAGCCATGTCAAGGTCAGGTGCATGGCCTGACCATTACACACTTCCCATTACTCTTAAGGCTGTAGGTCAAGTTTACTCCTTTAAGGCTAGCCAGCAGCTTCATGGGGTTGCTCTTCGTCATGGGCTTAATGGGCATGAGTTTGTTGAAAGTGGGCTCATTAGTATGTACGTCAAAAATGGTGAGTTTGGCAATGCGTATAAGGTGTTCGATGAAAGTCCTGAGGGAAATTTGGGCTCTTGGAATGCCATTATGGCTGGCCTTTCACAAGGTGGGCGAGGGCGGGATACTGTGGATATGTTTGTGGCAATGTGTAGGAGTGGAGTTAAGCCTGATGGTGTGACTATGGTTAGTGTTACTTCGGCATGTGGATGTTTGGGGGACTTGAAGTTGGGGTTTCAGTTGCATAAGTTTGTGTTTCAAGTTAAGGTTAGAGGGAAAGAGGATATTTTGATGCTAAATTCACTTGTTGATATGTATGGGAAATGTGGGAGGATGGACTTGGCTTATGAGGTGTTCTCTAGGATGGATCAAAGGAATGTGTCGTCATGGACATCGATGATAGTGGGTTATGCTATGCATGGACAGGCAAGTGAAGCGATGGAGTGCTTTCTTGCTATGATAAAAGCTGATGTGATGCCGAATCATGTGACTTTTGTTGGGGTTCTGAGTGCTTGTGTGCATGGTGGGATGGTGGGTGAAGGGAAGCACTGCTTCCAAATGATGAAGGAAGATTATGCGATTGAGCCCCGATTGCAGCATTATGGATGTATGGTGGACTTGCTTGGCAGAGCAGGTTTGCTAGAGGAGGCGCGAAATATGGTTGAGCAGATGCCTATGAAGCCAAATGCAGTGGTTTGGGGCTGCTTGTTGAGTGCTTGTGAGAGGCATAGTCATGTGAAAATGGGAGAGTGGGTGGCCAAGAATTTCCTTGAGCTGGAACCTTGGAATGATGGCATTTATGTTGTTTTGTCAAACATCTATGCCAGTAATGATATGTGGAAAGAGGTTGAAAGGATAAGAGAGATTATGAAGCGGAGAAGATTGGCTAAACTTCAAGGATACAGTTTGGTGACAGATATATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155173.p1 GENE.R_Transcript_155173~~R_Transcript_155173.p1 ORF type:complete len:476 (+),score=89.85,PPR|PF01535.16|0.29,PPR|PF01535.16|0.062,PPR|PF01535.16|0.023,PPR|PF01535.16|7.3e+02,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|9.9e-06,PPR|PF01535.16|0.23,PPR|PF01535.16|0.0087,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.1,PPR_2|PF13041.2|0.007,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|30,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|0.094,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|4.1e+02,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|6.5e+02 R_Transcript_155173:79-1506(+)
MISFPILHVRLHKLPLHKSSILSHKFNALLPQNPESNQNSTPNQTPSQTLQQNQGETIANLLSNCSNLPQLRQIHAHIIRNHFLEFNNAPFHWNNIIRAYTRLNSPCQAFLVYLAMSRSGAWPDHYTLPITLKAVGQVYSFKASQQLHGVALRHGLNGHEFVESGLISMYVKNGEFGNAYKVFDESPEGNLGSWNAIMAGLSQGGRGRDTVDMFVAMCRSGVKPDGVTMVSVTSACGCLGDLKLGFQLHKFVFQVKVRGKEDILMLNSLVDMYGKCGRMDLAYEVFSRMDQRNVSSWTSMIVGYAMHGQASEAMECFLAMIKADVMPNHVTFVGVLSACVHGGMVGEGKHCFQMMKEDYAIEPRLQHYGCMVDLLGRAGLLEEARNMVEQMPMKPNAVVWGCLLSACERHSHVKMGEWVAKNFLELEPWNDGIYVVLSNIYASNDMWKEVERIREIMKRRRLAKLQGYSLVTDIS*

Click here to download the sequence:
Link to NCBI Protein BLAST