Transcript Information: R_Transcript_155435.p1


Annotated TAIR IDAT5G48310.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19574961-19580362 | Reverse length=1156
E-Value4E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2220995944875
Replicate 20.91288262679557
Replicate 30.79675609030095
Condition 2: 8 Hour
Replicate 10.42584112951731
Replicate 20.38888490158584
Replicate 30.15784009235119
Condition 3: 24 Hour
Replicate 10.79853242531145
Replicate 21.3424940194264
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155435.p1 GENE.R_Transcript_155435~~R_Transcript_155435.p1 ORF type:complete len:115 (+),score=10.23 R_Transcript_155435:467-811(+)
ATGCCGTATGGGCTTCAATTGTTGCCTTGGAAACTCGGTTCTTTTGGAATTATTAAATCTATTCTGCTTGAAGACTTTATTTCCATGTTTTCTGAAGACTTTTGCATTTATTTGATCTTTATGTTGTCGAGTTTGATTACAGTTGCAGATGCCGTATCGGCTTTACTACTTATTTCTGGGTTACTGATTCTAGCTGCTTATTTCTGTTTTCTGTGCAACAATGATATGTTTCACTCACCCCAAGAGCATAATATGATCCTTTGTACCACACCCGGTTCTCTTTCCTTCCCTCCAAAAACTTCAATACACTCTGTAGAGAAGCAAAAGCAAAATGCATCAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155435.p1 GENE.R_Transcript_155435~~R_Transcript_155435.p1 ORF type:complete len:115 (+),score=10.23 R_Transcript_155435:467-811(+)
MPYGLQLLPWKLGSFGIIKSILLEDFISMFSEDFCIYLIFMLSSLITVADAVSALLLISGLLILAAYFCFLCNNDMFHSPQEHNMILCTTPGSLSFPPKTSIHSVEKQKQNASR*

Click here to download the sequence:
Link to NCBI Protein BLAST