Transcript Information: R_Transcript_155544.p1


Annotated TAIR IDAT1G13410.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4601526-4603174 | Forward length=474
E-Value4.9E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0129433576232
Replicate 20.941890112133
Replicate 31.0275919669302
Condition 2: 8 Hour
Replicate 11.3272711840563
Replicate 20.96130893896686
Replicate 32.6124747995697
Condition 3: 24 Hour
Replicate 12.2314130389544
Replicate 21.4016426210834
Replicate 32.0864914748257


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155544.p1 GENE.R_Transcript_155544~~R_Transcript_155544.p1 ORF type:complete len:535 (+),score=103.58,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00026,PPR|PF01535.16|5e-05,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|0.018,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.00053,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|1.7,PPR|PF01535.16|0.005,PPR|PF01535.16|1.1e+03,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.024,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|3.7e-07,PPR_2|PF13041.2|2.9e-05,PPR_2|PF13041.2|0.04,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|83,PPR_2|PF13041.2|2,PPR_1|PF12854.3|0.0065,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.00073,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|17,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0021,PPR_3|PF13812.2|0.0098,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|32,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|7.7e+03 R_Transcript_155544:611-2215(+)
ATGAAATATGCCAGTTGTCTCTTTGATCATATGCAAGACCCAAATGATGTAACTTACAATGTGATGTTTAAAGGGTACAGTCAAAATGGCCAATATGGTGAAGTGATTACCTTGTTTAGGAGAATGATGAGACTTGAAGTTAAGCCTAGCTGTTATACCTTCCCCATGGTTTTGAAAGCTTGTGGGAACTTGTCGGCGTTATCTGAGGGTCGGCAAGTGCACTCTTTTGTGATTAGAAATGGGTATAGAAGCAACCACTTTGTTGGTAATACATTGATTGAGATGTATTCAGGTGGGGGTGAAAGTGGGTTAGCTTATAGGGTGTTTGGTGAGATGCCTTTGAGGAATTTAGTTGCCTGGACTTCTATGATTAATGGGTTTATTTTGTGTGGCCGTATAGAGTCGGCCAAGAGTCTTTTTGACTTGGCTCCGGAGAGAGATGTTGTGTTATGGAATACCATGGTGTCGGGTTATATTGAAATTGGAGATATGGCAACTGCACGTAAGCTCTTTTATGAGATGCCAAGTAAGGATATAATGTCTTGGAATACTATGCTTGGTGGTTATGCAAACAAGGGGGATCTCGAGGCTTGTGAGAAATTGTTTCAAGAGATGCCAAAAAGGAATGTTTTCTCTTGGAATGGACTTATTGGTGCATATTCACGTCATGCGCATTTTTCTGAAGTTGTGACTACTTTTAAGCAAATGCTGATTGATTCCAGTGTACTTCCTAATGATGCTACACTGGTTTCCGTGTTGTCAGCATGTGCTAGATTGGGAGCACTTGACATGGGGAAGTGGTTACATATGTATGCCCAGAGTATTGGATATAAAGGAAATATCTATGTTGAAAATGCTTTGGTGGACATGTATGCGAAATGTGGGGAAATTGAAAAGGCTATCATTGTGTTCAAGGGCATGGTCAAGAAGGATCTTATATCTTGGAACACTATAATTGGTGGTCTTGCCATGCATGGTCATGCATTAGATGCCTTGGCTTTCTTTGATGAGATGAGAAATGCTGGTGTCAAACCTGATGCAGTCACCTTTATTGGTGTTCTATGTGCCTGTACCCATATGGGTTTAGTTGACAAGGGGCTAGCTTATTTTGAATCCATGGATAATTATTCTGTCAAGCCCCAGATTGAGCACTATGGTTGTGTAGTTGATTTATATGCCCGAGCAGGTCTTCTTGATGAGGCACTTAATTTTGTGAACAAGATGCCCTTGAAAGCAGATTCTGTCATTTGGGCTTGTTTGCTAGGGGCATGTAGGGTTTACAAAAATGTTGAAATTGCTGAGCTGGCTCTGCAACAACTCATTGAGCTTGAACCAGGGAACCCATCAAACTACCTTATGCTATCAAACATTTACGGGGATGCTGGAAAATGGGAAACCGTCTCTAAGCTAAAAGTCGCCATGAGGGATACTAGATTTAGGAAAATGCCTGGGTGTAGCATGATAGAGGTTCATGATGAAGTAGCTGAGTTCTATTCGTTGGATGAAAGGCATCCTGAAACAGAGAAAATATATGTATGCTTGAGAAGCTTGATCAAGCTAATAAGGTCGCTGCATCTTCAGCCTGAGGCTGTGGAGCTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155544.p1 GENE.R_Transcript_155544~~R_Transcript_155544.p1 ORF type:complete len:535 (+),score=103.58,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00026,PPR|PF01535.16|5e-05,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|0.018,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.00053,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|1.7,PPR|PF01535.16|0.005,PPR|PF01535.16|1.1e+03,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.024,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|3.7e-07,PPR_2|PF13041.2|2.9e-05,PPR_2|PF13041.2|0.04,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|83,PPR_2|PF13041.2|2,PPR_1|PF12854.3|0.0065,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.00073,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|17,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0021,PPR_3|PF13812.2|0.0098,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|32,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|7.7e+03 R_Transcript_155544:611-2215(+)
MKYASCLFDHMQDPNDVTYNVMFKGYSQNGQYGEVITLFRRMMRLEVKPSCYTFPMVLKACGNLSALSEGRQVHSFVIRNGYRSNHFVGNTLIEMYSGGGESGLAYRVFGEMPLRNLVAWTSMINGFILCGRIESAKSLFDLAPERDVVLWNTMVSGYIEIGDMATARKLFYEMPSKDIMSWNTMLGGYANKGDLEACEKLFQEMPKRNVFSWNGLIGAYSRHAHFSEVVTTFKQMLIDSSVLPNDATLVSVLSACARLGALDMGKWLHMYAQSIGYKGNIYVENALVDMYAKCGEIEKAIIVFKGMVKKDLISWNTIIGGLAMHGHALDALAFFDEMRNAGVKPDAVTFIGVLCACTHMGLVDKGLAYFESMDNYSVKPQIEHYGCVVDLYARAGLLDEALNFVNKMPLKADSVIWACLLGACRVYKNVEIAELALQQLIELEPGNPSNYLMLSNIYGDAGKWETVSKLKVAMRDTRFRKMPGCSMIEVHDEVAEFYSLDERHPETEKIYVCLRSLIKLIRSLHLQPEAVELK*

Click here to download the sequence:
Link to NCBI Protein BLAST