Transcript Information: R_Transcript_155565.p1


Annotated TAIR IDAT3G14040.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4648607-4650226 | Reverse length=445
E-Value2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0430263402696
Replicate 21.3997533610865
Replicate 31.5816556911629
Condition 2: 8 Hour
Replicate 10.93279485513315
Replicate 21.9698872098187
Replicate 31.6422885799398
Condition 3: 24 Hour
Replicate 11.6398433734074
Replicate 21.5228631138732
Replicate 30.78170373881776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155565.p1 GENE.R_Transcript_155565~~R_Transcript_155565.p1 ORF type:5prime_partial len:420 (+),score=63.09,Glyco_hydro_28|PF00295.13|5.2e-98,Beta_helix|PF13229.2|1.9e-06,Pectate_lyase_3|PF12708.3|1.3e-05,Pectate_lyase_3|PF12708.3|9.2e+02 R_Transcript_155565:1-1260(+)
AAAAAAAAAAAAAAAAAAAAAAAGGTCACCCCAAAACTAAAAAGAAAAAAAAAAAAGAGTTTTGATCTCCCATTTTTCTTGTCCCTATTGTATTTATTTGTATTGGTTGTAAGATCTCAAAATGTCCTGGATATAACAAAGTTCGGTGCAAAGTCTAACGCGGATGCTACGCAGGGTGTGATGGGTGCTTGGAAAGAAGCCTGTGCAGCAACAAGTCCTGCTAAGATTGTAGTCCCAGGAGGAACATTTTTGTTAGAACCTGTGAAGCTCATGGGTCCTTGCAAGTCCCCAGTTACAATCGAAATTTCAGGCAACTTCAAAGCCCCTCCAAACCCGGCCCAATTCAAAGGCGAAGACACCTGGGTTAAACTTGAGAACATTCAGGGCTTGACCATCACTGCACTCAAGGGGGGTGGAGTTTTTGATGGCCAAGGTGAGATGGCTTGGAAGCAAAATGATTGTGCTAAGAGCGGCTCATGCAATAACCTCCCTTATAATTTTAGGTTCAACATGCTGACCAACTCAGAGGTCCGTGGGATAAGCTCAGTGAACAGCAAGTTGTATCATATGGGAGTTTTGGGGTGCAAAAATTTTACATTAAAAGATATAACTATCACTGCTCCTAAAGACAGTCTTAACACAGATGGTATCCACATTGGAAGATCAGACGGGGTCACTGTAAGTCATGCTAAGATTGGTACAGGTGATGACTGTGTTTCACTAGGTGATGGCGCCAAGCAGGTCACCGTTGAAGGAGTCACCTGTGGTCCTGGCCATGGTATCAGCATTGGAAGCCTTGGAAGGTACCCGAATGAGGAACCTGTCTCAGGAGTTACCATCAAGAACTGCACTATCAGTGACACTGACAATGGCGTCAGGGTCAAGTCTTGGCTGAATTCATATGCCATGACTGGCTCAGACTTGCACTTTGAGGACATTACTGTCAACAATGTCCTTAACCCTATCATTGTTGATCAGGAATACTGCCCCTACAACCATTGCAAAGCTAAGACACCATCAAAGGTGAAGCTGAGCAAAATGAGCTTCAAAAACATAAAAGGAACAGCGGGAAGCCGAGAGGCAGTGAAGCTGATATGCAGCAGTGGAGCACCCTGTGACCAGGTGGAGCTTGCTGACATCGACTTGTCATTCAGTGGTGGGGCAGCTGTCTCACAGTGTAAGAACGTGAAGCCAATAACATCAGGCAAGCAGAATCCAGTAGCTTGTGGTGCACCTGCCCCTGGCGCGAGAAGAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155565.p1 GENE.R_Transcript_155565~~R_Transcript_155565.p1 ORF type:5prime_partial len:420 (+),score=63.09,Glyco_hydro_28|PF00295.13|5.2e-98,Beta_helix|PF13229.2|1.9e-06,Pectate_lyase_3|PF12708.3|1.3e-05,Pectate_lyase_3|PF12708.3|9.2e+02 R_Transcript_155565:1-1260(+)
KKKKKKKKVTPKLKRKKKKSFDLPFFLSLLYLFVLVVRSQNVLDITKFGAKSNADATQGVMGAWKEACAATSPAKIVVPGGTFLLEPVKLMGPCKSPVTIEISGNFKAPPNPAQFKGEDTWVKLENIQGLTITALKGGGVFDGQGEMAWKQNDCAKSGSCNNLPYNFRFNMLTNSEVRGISSVNSKLYHMGVLGCKNFTLKDITITAPKDSLNTDGIHIGRSDGVTVSHAKIGTGDDCVSLGDGAKQVTVEGVTCGPGHGISIGSLGRYPNEEPVSGVTIKNCTISDTDNGVRVKSWLNSYAMTGSDLHFEDITVNNVLNPIIVDQEYCPYNHCKAKTPSKVKLSKMSFKNIKGTAGSREAVKLICSSGAPCDQVELADIDLSFSGGAAVSQCKNVKPITSGKQNPVACGAPAPGARRR*

Click here to download the sequence:
Link to NCBI Protein BLAST