Transcript Information: R_Transcript_155657.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3274880694341
Replicate 20.38175091665997
Replicate 31.0412153452797
Condition 2: 8 Hour
Replicate 11.4468920196099
Replicate 21.1180440920593
Replicate 32.2276976670475
Condition 3: 24 Hour
Replicate 11.3565976998189
Replicate 20.60150706065211
Replicate 30.79591653406899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155657.p1 GENE.R_Transcript_155657~~R_Transcript_155657.p1 ORF type:5prime_partial len:220 (+),score=33.96,zf-RVT|PF13966.2|2.3e-15 R_Transcript_155657:1-660(+)
TATCTATTGTCAGTTTTGCACGTTGCTTCGATCTCTCAGTTCATGTCGGGTGCTAATGATACTTGGGATTTGCACTTGAGGAGACCGGTTAGAGAAAGTGAGCTGGAGGAGCTTTCCTTTTTCCTTGGTGTTCTAGAGTTTGCGGTTCTCTTTGATAGGGAGGATTCTTGGGTGTGGCAGGGTGACTCTTCTTGGGTGTTCTCTTGTGGGTCCTTTCTTTGCTGTTTGCAGGCATCTGGGGAGTCGGCTTTCCCTATAGCGAAGATCATTTGGAAGGCAAAAGCCCATCTTAAAGTCCAGGCTTTTGTTTGGATCTTAGCGTTGGGCAAGCTCAACACTAATGACATGCGCCAACGTCGGAGGCCAAATTGGTGTATATCACCTGACATGTGTGTGATGTGTGGTGAGGATTGTGAGACGGCTTCTCATTTGTTTTTACACTGCCGTGTGGCCTGGGTGCTTAGGTCTAGGCTCTTTGGTGTTCAGGGTGAGGCCTTGATCTGTCCCACTTCTGTCCTTGATTTTTTGCAGTGTGTGGGTTTTGGTAGGGGTAAAGCGTTGGGGGACCTTTTTGGTGCAATGTCTTGGCTTTTTTGTGGTGCATCTGGTCAGAGAGGAATGCTCGAGTGTTTGAACATACCTCGATGCCTGCGGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155657.p1 GENE.R_Transcript_155657~~R_Transcript_155657.p1 ORF type:5prime_partial len:220 (+),score=33.96,zf-RVT|PF13966.2|2.3e-15 R_Transcript_155657:1-660(+)
YLLSVLHVASISQFMSGANDTWDLHLRRPVRESELEELSFFLGVLEFAVLFDREDSWVWQGDSSWVFSCGSFLCCLQASGESAFPIAKIIWKAKAHLKVQAFVWILALGKLNTNDMRQRRRPNWCISPDMCVMCGEDCETASHLFLHCRVAWVLRSRLFGVQGEALICPTSVLDFLQCVGFGRGKALGDLFGAMSWLFCGASGQRGMLECLNIPRCLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST