Transcript Information: R_Transcript_155744.p1


Annotated TAIR IDAT5G05560.1
Annotated Gene NameE3 ubiquitin ligase, putative
Annotated Gene Symbol(s)EMB2771
Annotation TypeOrtholog
Chromosome Positionchr5:1641452-1654685 | Forward length=1678
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1619454078119
Replicate 22.7779008268531
Replicate 33.3084703694553
Condition 2: 8 Hour
Replicate 12.9831180558662
Replicate 23.5624558170356
Replicate 34.7530402671906
Condition 3: 24 Hour
Replicate 15.7457797582016
Replicate 24.121682890797
Replicate 36.5277002401386


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_155744.p1 GENE.R_Transcript_155744~~R_Transcript_155744.p1 ORF type:complete len:1814 (+),score=355.42,ANAPC1|PF12859.3|1.5e-15 R_Transcript_155744:207-5648(+)
ATGCCGGTAGGTGTTCGAGAGCTGAAAGTGTTGGGAGAATTCAAACCATTTGGTTTAATCGCCGAAGCACTCGACGGAAAACCCACCGAAAAAAATGTCTCAGACAAGTACGATTACTTCCTTTTCGACCCTGAAGTTACTAAAGAGAAAGACGAATTTCAGGTTTCCGATTCTTCGCTATCTTCTTCCTCCGGCGATGGTTGTGATCACGAGATATTTATTCGCGGAAATCGGGTAATGTGGATTACAGGTTCACGTGTGTACAAGAGATTCACCCTAAGTTCTCCAGTAATCATGGCATGTTGGTGTCATATGGCTCACACATCTCAGGCTGTGCTTTGTGTATTACAAGTTGATTCTTTGACAATTTTCAGCACTGCAGGTGAACTAACATCTATCCCACTTTCGGGAATAGTTACCTCAATATGGCCACTTCCATTTGGGTTACTTGTGCAGCAAGCAGCTGAAGGGAACCCTCCAAGTTACATTCCTTACTCATCCTCTAGCCCATTTTTAAGTGCTAGAGATATATCTCACTCAAAAAGTGAGGTCCGGCAAAGTCCCCAACAGGGCTTCGGATTTGCTATGAAAGGCAATGTAGCTTCAATCTCTTCACATCTAATTTTGACCGATCCACTTGAGGAACCCCAGCCAACTTATATTTATGAAAGAGGTGAATTGAAGATAATAAAAGATTTTGATGAGAGAACTATCTGGACAAGTGATCGCATTCCTCTCATTGCTTCCCATAATAGAGACAAGATGCAACACTCTCTTTGGGTAGCAGAATCTGTCAATCCTTGTCCTAGCGAGGAGGCAACTCCTAGTTCTCAGTTGTTTCAGTCTGAGGTTGTCCCAAGGCAATTCTCTTTTCGAAGAATCTGGCAAGAAAAAGGTTCCCAGACGGCTGCTACCAAGGTCTTTTTGGCCACAGACGATGATGCAGCACCTATTATTTGTTTCCTTCTCCAAGAACATAAAAAGTTATTAGCCATAAGGCTTCAAACTGTTAAAGTTAATGACGACATGCTCATTGATGTAAAACCAGACATGAGTTGGAGCATACAAGCAGTTGCCGCAGAACCTGTTGCTGTTACCCGTTCAAGAATGAAGGTCGGGCTGCTGCCATTTGCAGATATTCTTGTTCTGGATCCAGATAACAATGTATATCTATATTCAGGGAAGCAGCGCCTTTGTAAATATATACTTCCTTCATGCTTAAGCAAACGGCTTCTTGAAGAAAATGTTACGATCCCAGCCATTCACAAAGTGAAAATAATAGGATTGGCTGATGCTGTTGGGACCCGTATAAATTTAATTTTAAGCAGTGGGCAGATGCTTAGATGTGCATTGCGAAGAGGCCCTTCATGCTCTGTTTCAAATGATTGCATCACAGCAATGGCTGAGGGGCTTAGTTCCCCCTTTTATAATAATTTCCTTCAGCTTTTTTGGGGAACTTGTGATCCTGGCTATGTGGAAAATGATAGCTCTAGTGTTGATTCTGAGTGGGAGTATTTTACAAGCATCATAATGCAGCTGTACAGGAAATCTTCATCAACATCACATCGAGATCCATTTCTTGTTTCATCCTCATCTTGGAACTTTCTCATTAATAGTGAATTTCATAAGAACTATCGCAACCGTAACTTGTTCACTGCGATCATAACTGAAGGTTTAGTTGACGAACGTGAAAATCGCTCGTCTTCTTCAAGCAGTGAAGATCTGCATAGCCCCAAAGGATTCCCTGATGCCAAGTTTTTGATTGAGTGTTTGGAGTCTCTGCATGCAGTTTATGAAAATCTCAAACTAATCAATCTTCGGAAGCGGGATTTGGAACTACTAGTCGTTCTTCTATGTGACATTGCTAATTTTCTTGGAGAGGAGAGTTATGTTGATCACTATATTCGTGATTTTCCTTATCTGGCCAAGAAAATACGAAAATCTCAGCCTTCATCTTCAAGAAGATTCCCACCAAGTTTATACAGATGGCTTGAAAACTGTTTGTTACATGGCCTTCATGCTGCAGCTATTGATGACTTGCCATCTTTGGTTTGTAAGGATGGAATCTCCTCTGTGAGCTGGTCTCGAAAAGTAGTTTCATTCTATAGCTTATTATCAGGTGCGGCACAAATGGATAGGAAGCTCTCTTCTGGTGTATGTTGTAATATTGCTTCAGGTTCATCATCAACAGTTGAGGAGCAAACAGTCCTTGCTATGGTTGCTGAAGGATTTGGTTTGCAGCAGCTTGATCTATTGCCTATTGGTGTTTCATTACCTCTGAGACATGCAGTAAATAAATGCCGGGAATCCCCTCCCACAGACTGGCCAGCAGCGGCATATGTCCTTCTTGGTCGGGAAGAATTGGCTTTGTCTTGCGTGACACACTTGAAAAAATCACAAGAGCTTGAAACTCAAACCAACAGACATTTAATTTCAATGTCAACGCCATACATGCAACATTTACAGCCAGTGACAATTCCGTCTACCGTTTCAGACACCATTGGATTGGATAATCTTAAGTTTGAAGACATGGATACTTCTGATGATTCTACAATAGATGGCATGGAACATTTGTTCAACTCTAGCACTCAGTTGCGGTATGGTAGAGATCTGCGTTTGAATGAGGTCAGACGTCTTTTGTCCTCTGCGAGACCTGTTGCAATTCAAACATCTGTTAGTCCTACTGCGTCAGATCAGGACCTGCAACAGGCTCAGCTGTGGCAGTTTGCCCAAAGGACAACTGCTCTACCTTTCGGCCGTGGAGCTTTTACTCTTGCTACCACCTGTACTCTTTTGACCGAGGCGCTCACAGTTCCAAAGCTTGTTTTGGCTGGACGGTTGCCTGCTCAGCAAAATGCCACTGTTAATATAGACCCAAATGTACGGAATTTGCAAGAACTTCGGGCCTGGCCTGAGTTTCACAATGCAGTGGCTGCTGGATTAAGGCTCGCTCCATTTCAGGGTAAAATGTCAAGAACTTGGATCATATATAACAAGCCTGAGGAACCAAATGCAATTCATGCAGGTCTTCTCCTTGCATTGGGGTTACATGGACACCTAACCGTTCTAACAATAAGCGACATATTCCAGTACTATCAACAGGGTCATGAAAGCACAACTGTTGGGTTAATGCTTGGTCTGGCAGCATCATACAGGGGTACAATGCAGCCAACTATGTCAAAGTCCTTCTATGTTCATTTACCTGCCTATCATCCTTCTTCCTTCCCTGAGCTTGAAGTTCCAACAGTTCTGCAGTCTGCGGCATTGATATCTCTTGGTCTCCTGTTTGAGGGTTCTGCGCATCCTCAGACAATGCAGTTTCTTCTGGCCGAAATAGGTCATAGAAGTGGTGGTGATAATGTGCTTGAGAGGGAGGGCTATGCTGTGTCGGCTGGATTTTCACTTGGACTAGTTGCTTTGGGTCGTGGTGAGGATAAATTTGCTTGCATGGACACTCTGGTTGATCGGTTGTTCCAATATGCTGGTGGAAGTTATAATGAGAAGACCCGATTGACACCAGTGATGGATGAACACAACCGGGGAGCTGGACAGATGCTGGATGGTATCCCTGTCAATGTTGATGTCACTGCACCAGGAGCTATAATTGCATTAGCTTTGATGTTCATGAAGACTGAGTCAGAAGTGATATTTTCCAGACTTTCTATTCCTCAAACAAATTTTGAGTTGCAATACTTGAGGCCGGACTTCATAATGCTTCGTGTCATTGCACGCAACTTAATAATGTGGGGCAGGATTAATCCATACAAAGAATGGGTAGAATCTCAGATTCCTCAGATTGTGAAAGATGGTGTTGAAAATCTTGGAGATGATCACATTGATATGGATGATGTGGATGAAGAAGCAGTTGTCCAGGCATATGTGAATATTGTGGCTGGAGCCTGCATTTCTCTTGGGTTGAAGTATGCCGGATCAAGAAATGGCAATGCTCAAGATTTGCTCTACAGTTATGCTATGTACTTCCTGAATGAGATTAAGCCTGTTTCTGGTTCAGTTTCCGGTGCATTTCCTAGAGGTTTATCAAAGTTTGTGGACCGCAGCACATTGGAGATATGCCTTCATCTTGTTGTTCTTTCCTTGGCTTTGGTCATGGCTGGTTCTGGGAATCTGCAAACATTTCGATTGCTGAGATTTTTACGCTGCAGAAACTCTTCTGATGGCCAAGCTAATTTCGGCATTCAGATGGCTGTAAGCTTGGCAATCGGCTTTTTGTTTCTTGGAGGAGGAATGCAATCATTTTCGACTAGTAAAGGTGCTGTTGCTGCCTTGTTAATCACTCTTTATCCTCGCTTTCCGACTGGACCAAATGATAACCGTTGCCACCTTCAGGCATATAGGCATTTCTATGTCCTTGCTACAGAAGCTCGCTGGATTCAAACAGTTGACGTTGACACTGGATTACCTGTTTATGCCCCTCTTGAAATTACTGTTAAAGAAACTGAACATCATGCAGAAACAAGTTTTTGTGAGGTCACACCCTGCATCCTTCCAGAACGAGCTATTCTAAAGACTGTTCGTGTTTGTGGCCCAAGGTATTGGTCCCAAGTCATAGATCTTACTCCTGAAGATAAACCTTGGTGGGTTGCTGGTGACAAGAGTCATCCATTTAATTCTGGTGTTTTATACATCAAAAGAAAGGTCGGAGCATGTTCATATGTGGATGATCCTGTTGGTTGCCAGTCATTAATCTCACGAGCAATGAACAAGGCATTTAGTTTGACAACTGTGAGATGTCATGCTTCCAATATGAATACTTATGCTAAAGCAGGTTCAAGTAGAGTTGATCACTTGGTTAGCACATTTTCATCCGATCCAAGCTTAATTGCTTTTGCTCAGCTCTGCTGTGACTCTTCCTGGAACAGCAGGTCAGATATTGATTTCCAGGAGTTTTGCCTGCAAGTTTTATTTGAATGTGTCAGCAAGGACAGGCCAGCTCTTTTGCAGGTCTACATGTCTTTGTATACAATGGTCAAGTCAATGACTGAACAGGTCACAAGCGAAGTTGTCATCTTCTCTGATTCCCTTTCTATCTCTGATCTGAAGCTTGTTGTAGCGTACAATGAGGCCTTGTTGACAGGAAGATTAGTAACATCAAGGGATGGCATTGTCCAAAGTAACTTTATAGCTTCTCTAAGGAAGCGGATAGAGGACCTCTTTTGTTGTGCTCAGGAAATGAAGCCTGATTTGCATGCATACTTGGCTTCTGGGAAATGGCCAGACAAGCTCAAAAGTGAAAAATGTTTACTGCTGTCGTGGTATCTAAAGTGGTTTTGTGTACCATCTCCATCTGTAATCCAGGCAGCTGTGGAGAGGATAAAGCCCAAGATCAAGAAATCATCATCAATTCCTTTGTTGCGGCTAATGTTGCCTCGGACTCATGTTAGCGCAATTTCTGAGATTGAAAAGTCATTGATTACTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_155744.p1 GENE.R_Transcript_155744~~R_Transcript_155744.p1 ORF type:complete len:1814 (+),score=355.42,ANAPC1|PF12859.3|1.5e-15 R_Transcript_155744:207-5648(+)
MPVGVRELKVLGEFKPFGLIAEALDGKPTEKNVSDKYDYFLFDPEVTKEKDEFQVSDSSLSSSSGDGCDHEIFIRGNRVMWITGSRVYKRFTLSSPVIMACWCHMAHTSQAVLCVLQVDSLTIFSTAGELTSIPLSGIVTSIWPLPFGLLVQQAAEGNPPSYIPYSSSSPFLSARDISHSKSEVRQSPQQGFGFAMKGNVASISSHLILTDPLEEPQPTYIYERGELKIIKDFDERTIWTSDRIPLIASHNRDKMQHSLWVAESVNPCPSEEATPSSQLFQSEVVPRQFSFRRIWQEKGSQTAATKVFLATDDDAAPIICFLLQEHKKLLAIRLQTVKVNDDMLIDVKPDMSWSIQAVAAEPVAVTRSRMKVGLLPFADILVLDPDNNVYLYSGKQRLCKYILPSCLSKRLLEENVTIPAIHKVKIIGLADAVGTRINLILSSGQMLRCALRRGPSCSVSNDCITAMAEGLSSPFYNNFLQLFWGTCDPGYVENDSSSVDSEWEYFTSIIMQLYRKSSSTSHRDPFLVSSSSWNFLINSEFHKNYRNRNLFTAIITEGLVDERENRSSSSSSEDLHSPKGFPDAKFLIECLESLHAVYENLKLINLRKRDLELLVVLLCDIANFLGEESYVDHYIRDFPYLAKKIRKSQPSSSRRFPPSLYRWLENCLLHGLHAAAIDDLPSLVCKDGISSVSWSRKVVSFYSLLSGAAQMDRKLSSGVCCNIASGSSSTVEEQTVLAMVAEGFGLQQLDLLPIGVSLPLRHAVNKCRESPPTDWPAAAYVLLGREELALSCVTHLKKSQELETQTNRHLISMSTPYMQHLQPVTIPSTVSDTIGLDNLKFEDMDTSDDSTIDGMEHLFNSSTQLRYGRDLRLNEVRRLLSSARPVAIQTSVSPTASDQDLQQAQLWQFAQRTTALPFGRGAFTLATTCTLLTEALTVPKLVLAGRLPAQQNATVNIDPNVRNLQELRAWPEFHNAVAAGLRLAPFQGKMSRTWIIYNKPEEPNAIHAGLLLALGLHGHLTVLTISDIFQYYQQGHESTTVGLMLGLAASYRGTMQPTMSKSFYVHLPAYHPSSFPELEVPTVLQSAALISLGLLFEGSAHPQTMQFLLAEIGHRSGGDNVLEREGYAVSAGFSLGLVALGRGEDKFACMDTLVDRLFQYAGGSYNEKTRLTPVMDEHNRGAGQMLDGIPVNVDVTAPGAIIALALMFMKTESEVIFSRLSIPQTNFELQYLRPDFIMLRVIARNLIMWGRINPYKEWVESQIPQIVKDGVENLGDDHIDMDDVDEEAVVQAYVNIVAGACISLGLKYAGSRNGNAQDLLYSYAMYFLNEIKPVSGSVSGAFPRGLSKFVDRSTLEICLHLVVLSLALVMAGSGNLQTFRLLRFLRCRNSSDGQANFGIQMAVSLAIGFLFLGGGMQSFSTSKGAVAALLITLYPRFPTGPNDNRCHLQAYRHFYVLATEARWIQTVDVDTGLPVYAPLEITVKETEHHAETSFCEVTPCILPERAILKTVRVCGPRYWSQVIDLTPEDKPWWVAGDKSHPFNSGVLYIKRKVGACSYVDDPVGCQSLISRAMNKAFSLTTVRCHASNMNTYAKAGSSRVDHLVSTFSSDPSLIAFAQLCCDSSWNSRSDIDFQEFCLQVLFECVSKDRPALLQVYMSLYTMVKSMTEQVTSEVVIFSDSLSISDLKLVVAYNEALLTGRLVTSRDGIVQSNFIASLRKRIEDLFCCAQEMKPDLHAYLASGKWPDKLKSEKCLLLSWYLKWFCVPSPSVIQAAVERIKPKIKKSSSIPLLRLMLPRTHVSAISEIEKSLITV*

Click here to download the sequence:
Link to NCBI Protein BLAST