Transcript Information: R_Transcript_15603.p1


Annotated TAIR IDAT1G56110.1
Annotated Gene NameHomolog of nucleolar protein NOP56
Annotated Gene Symbol(s)NOP56
Annotation TypeOrtholog
Chromosome Positionchr1:20984544-20986893 | Reverse length=522
E-Value1.2E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1148.41360069238
Replicate 2208.58845094424
Replicate 3178.90499477715
Condition 2: 8 Hour
Replicate 1147.79684112183
Replicate 2123.0031487205
Replicate 3122.96156523368
Condition 3: 24 Hour
Replicate 1198.24122902351
Replicate 2201.09631305958
Replicate 3177.21518017362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15603.p1 GENE.R_Transcript_15603~~R_Transcript_15603.p1 ORF type:5prime_partial len:611 (+),score=179.47,Nop|PF01798.14|1.8e-89,NOP5NT|PF08156.9|3.3e-19,NOP5NT|PF08156.9|1.2e+04 R_Transcript_15603:2-1834(+)
TCTGTCCTTGGTCTTATTTCCTCACCGAAAACCCTAAACCCTGTTAAAACTACTCAACAGCAAACAAGCTTAGCCTTCTTCTCTATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTGGAAAAGGGGGGCAGAGGAGCAAAGGGGGGAAAAGATGGGGACGTACTTGTTGTTTGAGTCACCATCAGGGTATGCTCTGTTTCATGCAAATGGGTTGGATGAAATTGGGCAGAACACAGGTGCTGTTAGGGAGTCTGTTACTGACCTTAACAGGTTTGGTAAAGTTGTTAAGCTTACTGCTTTTCAACCTTTTGAGTCTGCCCTTGATGCTCTCACTCAATGCAATTCTGTCTCTGAAGGTATCATGACTGATGAGTTGAGAAATTTCTTGGAGCTGAATTTCCCACAGAAGGGAAAAGACTTTGTTCTAGGAGTCGCTGACTCGAGACTTGGAGCAAGTATTTCAGAAGGAACTAAGATTTCATGCCGATGTAATGAGTTTGTCCTAGAACTTCTCCGTGGTGTGCGTACACACTTTGAGAAGTTCATCAAGGAACTCAAGCCTGGTGATTTGGAGAAAGCTCAACTAGGTCTTGGACACAGTTACAGCAGAGCCAAAGTCAAATTCAATGTTAACCGTGTTGATAACATGGTCATTCAAGCTATCTTTCTTCTCGACACTCTAGATAAAGACATAAACTCATTTTCCATGAGAGTCAGAGAATGGTACTCTTGGCATTTCCCTGAACTAGTAAAGATAGTCAACGACAACTACCTCTACGCAAAGGTAGCAAAATTCATTGAGAACAAGTCAGAGTTATCTGAGGACAAACTTCCTGCCTTAACTGAAATTCTCGGTGATGAAGATAAGGCTAAGGAGATTGTTGAAGCAGCCAAGGCATCTATGGGACAAGACTTGTCTCCTGTTGATTTGATCAATGTGCAGATGTTTGCTCAAAGAGTGATGGATCTTGCTGAGTACAGAAAGAAGCTTTTTGACTACTTGGTCACAAAAATGAACGACATAGCACCTAATTTGACCTCTTTGATTGGTGAGATTGTTGGGGCCAGATTGATCTCCCATGCAGGCAGTCTTACAAACCTAGCAAAGTGCCCTTCTTCAACACTCCAAATTCTTGGTGCTGAGAAGGCACTTTTTAGGGCTCTGAAAACAAAAGGAAATACGCCAAAGTATGGTCTGATATTCCATTCATCATTTATTGGAAGAGCTTCCTCTAGGAACAAAGGCCGCATGGCTCGCTACCTAGCTAACAAGTGCTCCATTGCATCTCGTGTTGACTGTTTCTCAGAGAGGGGTACTACTGCTTTTGGTGAAAAGCTTCGTGAACAAGTAGAGGAGCGACTTGACTTCTACGACAAGGGAGTAGCACCAAGGAAAAACATTGATGTCATGAAAGCAGCCCTTGAAATTTCCCAAAAGAATGATGACGATATGGACTTGGATGAGAAACCTGACTCTGCCGTAAAAAAGAGCAAGAAAAAGAAATCAAAGGGTGAGGATGAGGATGTTGCTGCAACAAATGGTCATGGATCAGAGGATATGAAGTCCGAGAAGAAGAAAAAGAAAGACAAGACAGAGCCAGTAAGTGAGGAACAGGATCACGAAGATGCCAAGTCTGAGAAGAAAAAGAAGAAGAAAGATAAGCGCAGATTAGAGGAACAGGAACAGGCCGAACCCGAGGAGGATGGAACAAGCAAGAAGAAGAAGAAAAAGAAAAGCAAAGACGAGGGAGAGGATGTATCAGCCGTAAGTGAAGGCAAGAAGAAGAAAAAGAAGAAGTCGAAGAATGAAGAGGAGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15603.p1 GENE.R_Transcript_15603~~R_Transcript_15603.p1 ORF type:5prime_partial len:611 (+),score=179.47,Nop|PF01798.14|1.8e-89,NOP5NT|PF08156.9|3.3e-19,NOP5NT|PF08156.9|1.2e+04 R_Transcript_15603:2-1834(+)
SVLGLISSPKTLNPVKTTQQQTSLAFFSISSSSSSSSSSSSAWKRGAEEQRGEKMGTYLLFESPSGYALFHANGLDEIGQNTGAVRESVTDLNRFGKVVKLTAFQPFESALDALTQCNSVSEGIMTDELRNFLELNFPQKGKDFVLGVADSRLGASISEGTKISCRCNEFVLELLRGVRTHFEKFIKELKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFIENKSELSEDKLPALTEILGDEDKAKEIVEAAKASMGQDLSPVDLINVQMFAQRVMDLAEYRKKLFDYLVTKMNDIAPNLTSLIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASSRNKGRMARYLANKCSIASRVDCFSERGTTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAALEISQKNDDDMDLDEKPDSAVKKSKKKKSKGEDEDVAATNGHGSEDMKSEKKKKKDKTEPVSEEQDHEDAKSEKKKKKKDKRRLEEQEQAEPEEDGTSKKKKKKKSKDEGEDVSAVSEGKKKKKKKSKNEEED*

Click here to download the sequence:
Link to NCBI Protein BLAST