Transcript Information: R_Transcript_156128.p1


Annotated TAIR IDAT4G30480.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR1, AtTPR1
Annotation TypeOrtholog
Chromosome Positionchr4:14897500-14898937 | Forward length=277
E-Value3.5E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.476741485552
Replicate 232.19432730499
Replicate 344.286359352561
Condition 2: 8 Hour
Replicate 142.27033527735
Replicate 253.744575653376
Replicate 361.524406523838
Condition 3: 24 Hour
Replicate 149.379423966957
Replicate 241.247203469045
Replicate 353.528877778131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_156128.p1 GENE.R_Transcript_156128~~R_Transcript_156128.p1 ORF type:5prime_partial len:285 (-),score=72.83,TPR_11|PF13414.2|8.5e-15,TPR_11|PF13414.2|2.1e-12,TPR_1|PF00515.24|4.9e+03,TPR_1|PF00515.24|0.00033,TPR_1|PF00515.24|0.00013,TPR_1|PF00515.24|3e-08,TPR_2|PF07719.13|7.1e-05,TPR_2|PF07719.13|0.042,TPR_2|PF07719.13|5.7e-08,TPR_12|PF13424.2|6.9e-08,TPR_12|PF13424.2|1.9e-08,TPR_8|PF13181.2|5.4,TPR_8|PF13181.2|0.24,TPR_8|PF13181.2|1.9e-07,TPR_19|PF14559.2|0.00095,TPR_19|PF14559.2|8.1e-05,ANAPC3|PF12895.3|0.00042,ANAPC3|PF12895.3|1.2e-06,TPR_14|PF13428.2|1.6,TPR_14|PF13428.2|23,TPR_14|PF13428.2|0.00092,TPR_17|PF13431.2|7.3e+02,TPR_17|PF13431.2|5.5e+02,TPR_17|PF13431.2|0.00017,TPR_17|PF13431.2|62,TPR_7|PF13176.2|4e+03,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|64,TPR_7|PF13176.2|0.05,TPR_16|PF13432.2|0.047,TPR_16|PF13432.2|0.0027,TPR_9|PF13371.2|2.5,TPR_9|PF13371.2|7.1e-05,Fis1_TPR_C|PF14853.2|11,Fis1_TPR_C|PF14853.2|5.2,Fis1_TPR_C|PF14853.2|0.0073,DUF3856|PF12968.3|1.5e-05,TPR_6|PF13174.2|33,TPR_6|PF13174.2|1.2e+02,TPR_6|PF13174.2|0.021 R_Transcript_156128:207-1061(-)
AGCAAGAGAGAGAAAATGGTGATGATCGAAGATGAAGAACCACAACAAAAAGTGATCTCCAGCTGCAAAGAGGCAGAAGAAACGGTCTCGACGACGAGGAACTCCACCGATGAACCGTCAGTTCCAGATTCCGGAACCGAAATGGTAATCGAAACGCCGTCCGTGACTAAGGACGTTTCTGAAGGCTTTGAAACGGCTAGCGAAGGAAGTGAGAATGAGGATGATGAAGGACGGCAAGAAGAACAAGTTTCGCCGGAGGAGGCGCCGAGAAAGGTTGATTCTTACGAAGATGCTCTCGATGATGATCAATTGAAGCAGAAAGCTTTAGCACGAGCAAATGATGCAAAGGTGGAAGGGAATGCATTGTTTAAAGATGGCCAGTATGAGGATGCAATATTAAAGTATGAATCTGCTCTGCAATTAGCACCAGAAATGCCATCATCAGTGGAGCTACGTTCCATATGTCATGCGAACTGTGCCATATGCTACCTAAAATTGGGGAAGTATGATGAAACAGTCAAGGAATCCACAAAAGCATTGGAACTAAATCCATCATATGTTAAAGCTCTTGTTAGGAGAGGAGAGGCTTATGAAAAGCTTGAAAAATATGAAGAAGCTATTGCTGATATGAAGAAAATTTTGGAGTTGGATCCTTCAAATGATCAGGCCAGGAGAAATATTGTTCGCTTGGAGCCATTGGCCCGGGAGAAGATGGAAAAAATGAAGGAAGAAATGATTGGGAAGCTAAAAGAGATGGGCAACTCGTTGCTTGGTCGCTTTGGGATGAGCATTGACAATTTCAAAGCTGTTCAAGATCCTAACACTGGTTCTTATTCTATTCAATTCCAACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_156128.p1 GENE.R_Transcript_156128~~R_Transcript_156128.p1 ORF type:5prime_partial len:285 (-),score=72.83,TPR_11|PF13414.2|8.5e-15,TPR_11|PF13414.2|2.1e-12,TPR_1|PF00515.24|4.9e+03,TPR_1|PF00515.24|0.00033,TPR_1|PF00515.24|0.00013,TPR_1|PF00515.24|3e-08,TPR_2|PF07719.13|7.1e-05,TPR_2|PF07719.13|0.042,TPR_2|PF07719.13|5.7e-08,TPR_12|PF13424.2|6.9e-08,TPR_12|PF13424.2|1.9e-08,TPR_8|PF13181.2|5.4,TPR_8|PF13181.2|0.24,TPR_8|PF13181.2|1.9e-07,TPR_19|PF14559.2|0.00095,TPR_19|PF14559.2|8.1e-05,ANAPC3|PF12895.3|0.00042,ANAPC3|PF12895.3|1.2e-06,TPR_14|PF13428.2|1.6,TPR_14|PF13428.2|23,TPR_14|PF13428.2|0.00092,TPR_17|PF13431.2|7.3e+02,TPR_17|PF13431.2|5.5e+02,TPR_17|PF13431.2|0.00017,TPR_17|PF13431.2|62,TPR_7|PF13176.2|4e+03,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|64,TPR_7|PF13176.2|0.05,TPR_16|PF13432.2|0.047,TPR_16|PF13432.2|0.0027,TPR_9|PF13371.2|2.5,TPR_9|PF13371.2|7.1e-05,Fis1_TPR_C|PF14853.2|11,Fis1_TPR_C|PF14853.2|5.2,Fis1_TPR_C|PF14853.2|0.0073,DUF3856|PF12968.3|1.5e-05,TPR_6|PF13174.2|33,TPR_6|PF13174.2|1.2e+02,TPR_6|PF13174.2|0.021 R_Transcript_156128:207-1061(-)
SKREKMVMIEDEEPQQKVISSCKEAEETVSTTRNSTDEPSVPDSGTEMVIETPSVTKDVSEGFETASEGSENEDDEGRQEEQVSPEEAPRKVDSYEDALDDDQLKQKALARANDAKVEGNALFKDGQYEDAILKYESALQLAPEMPSSVELRSICHANCAICYLKLGKYDETVKESTKALELNPSYVKALVRRGEAYEKLEKYEEAIADMKKILELDPSNDQARRNIVRLEPLAREKMEKMKEEMIGKLKEMGNSLLGRFGMSIDNFKAVQDPNTGSYSIQFQR*

Click here to download the sequence:
Link to NCBI Protein BLAST