Transcript Information: R_Transcript_156272.p1


Annotated TAIR IDAT5G37190.1
Annotated Gene NameCOP1-interacting protein 4
Annotated Gene Symbol(s)CIP4
Annotation TypeHomolog
Chromosome Positionchr5:14723362-14726694 | Reverse length=876
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48954301411123
Replicate 20.36200517959135
Replicate 30.3949437516578
Condition 2: 8 Hour
Replicate 10.51598565980785
Replicate 20.59971713750306
Replicate 30.83455681013273
Condition 3: 24 Hour
Replicate 11.0115508931747
Replicate 20.33801163050693
Replicate 31.0482617187211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_156272.p1 GENE.R_Transcript_156272~~R_Transcript_156272.p1 ORF type:3prime_partial len:522 (+),score=146.63 R_Transcript_156272:81-1643(+)
ATGGCTAAACGTAAGGCAACCTTTGATAGCAACGATGATGATAACAAAGAAGAAGAAGAACGACAACAACGGCCAGTTTATATAGAGACAAGTCTCAACACCCACCTCGTACTTCAAGTTTACCCTTCTGACACTGTCACCACCCTCAAACAAAAATTCTTGCTTGAGCATGCTGATGCCTATCCAGACATTGGGGAGATTCAAGTCACTGCCTTTAAGGTAAAGCAGAAGGGAAGTTATTTTCGTCTAGCAAACTCTATGCTTGTTAAAACTGCCTTTTATGGGGTGGTGAAGCCTTGGTTTTTATATGCTGATGCTGTTGTTACTCAAAGAGCTTGTGTTAATCAAACCCTTGCAATTATCCCCCATAGAGGACAACCCACTCCTTTTGCTTCTTTCAAGCCTGGGGAGTTGAAGATTGAGGGAAATAATAAGGAGGATCGTTTCGGAACGAACCCGTACAATACTGAGAACATGTTGCAACTCAAGGATTTGAGCGCTAAGGCCGGTCTGAGTAGAAAGAAAAAGAAAAGCAGAGTGCTGAATTTTGATAATGAGGATGAGAATGATGATGTACAAAGGTCAAGTCTTCTAGGGAGCTATATTACTCCAGTTGATGATGATCAAGGCAAAGCCTTTGGGCCGGCAAGTAAATCTATGTCAGGTTCTGTAGTACAGAAAGACCCGCATTTAAATTGCAAGGGGAGTGAAGGTCCCGCAACAGAAGGCAATGTGAAGAATGTTGGTGATGGTACTGAGTTGAAGGATAGTGTTGACGACAAATCTTTCCAATCTGGCTCTCCTGCTAAGAAGAAACGCAAAGTTGTGAATGACAATGCTCAAGAGTTGTCTTTGTTGGGAGCCAAATCTCTACTCTCTGATCCTAATAGAGCAGCTTCCAAGCCAGAAACTCTAGTCAACAATTTTGATGGAGAAGACATGCAGAAAAGTAGATTGGTTGATTCGAATGCCATGCCATCTGAAGTCCTCAAAATTTCTAAAGCCTCTAAAAAATGGAAAATGGAAGAAAGGGATGTGAATTGCGAGGTCCCTTCTTCAGAAGCCAGTAAAGAGGAGAACTTGAAAGACACAGAGCGTCATGCTTGTGATGCTTCTGCTATAGCCACTGATACAGCAGCAGAGGTGGAAGTTAAGAGGTTCCAGTCATTGGATATGCCTTTGGGAGTTGTTGGCAACAATCATCAGCCAGAAGGGACTACCGCAAGTTTTGCTGAACATGTTGACACTGAAAACAGTGGACTAGCAAATGGGAATGGGGTTAAGAAAGCAAAGGAATTTGATGGTGGTGAAACTCAAGGAACCCATCATACAACTTCAAGTGAAGTGCCCGATAAGTTGGAGGACAGTTTTGCACCTTTAGAGGGTGAAAATACCATCCGTGACAGTGAACCTGACAACATGACAATTGCTGAAGGAATAAAAGCTACAAATGAAACTGTGGAGCTAGCGAGCACAGCCAAGAAAAAGAAGGCAAAGAAAGGGAAGAACTCTCTTGCAGATAGGCCAGACTTCATGAGCATTGAAAATAACCATCAGAATGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_156272.p1 GENE.R_Transcript_156272~~R_Transcript_156272.p1 ORF type:3prime_partial len:522 (+),score=146.63 R_Transcript_156272:81-1643(+)
MAKRKATFDSNDDDNKEEEERQQRPVYIETSLNTHLVLQVYPSDTVTTLKQKFLLEHADAYPDIGEIQVTAFKVKQKGSYFRLANSMLVKTAFYGVVKPWFLYADAVVTQRACVNQTLAIIPHRGQPTPFASFKPGELKIEGNNKEDRFGTNPYNTENMLQLKDLSAKAGLSRKKKKSRVLNFDNEDENDDVQRSSLLGSYITPVDDDQGKAFGPASKSMSGSVVQKDPHLNCKGSEGPATEGNVKNVGDGTELKDSVDDKSFQSGSPAKKKRKVVNDNAQELSLLGAKSLLSDPNRAASKPETLVNNFDGEDMQKSRLVDSNAMPSEVLKISKASKKWKMEERDVNCEVPSSEASKEENLKDTERHACDASAIATDTAAEVEVKRFQSLDMPLGVVGNNHQPEGTTASFAEHVDTENSGLANGNGVKKAKEFDGGETQGTHHTTSSEVPDKLEDSFAPLEGENTIRDSEPDNMTIAEGIKATNETVELASTAKKKKAKKGKNSLADRPDFMSIENNHQNA

Click here to download the sequence:
Link to NCBI Protein BLAST