Transcript Information: R_Transcript_156527.p1


Annotated TAIR IDAT5G18810.1
Annotated Gene NameSC35-like splicing factor 28
Annotated Gene Symbol(s)SCL28, At-SCL28
Annotation TypeOrtholog
Chromosome Positionchr5:6268925-6271158 | Reverse length=236
E-Value1.8E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.998174765494
Replicate 213.213189055084
Replicate 311.848312549734
Condition 2: 8 Hour
Replicate 112.295703734285
Replicate 212.288846701514
Replicate 314.00490647004
Condition 3: 24 Hour
Replicate 116.179316731593
Replicate 212.69128043919
Replicate 316.604465624543


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_156527.p1 GENE.R_Transcript_156527~~R_Transcript_156527.p1 ORF type:5prime_partial len:464 (+),score=77.21,RRM_1|PF00076.18|8.1e-18,RRM_6|PF14259.2|4.4e-14,RRM_5|PF13893.2|5e-06 R_Transcript_156527:2-1393(+)
TATAATTTGCGCCCAAATCCGCGATTTGCTTATCTGCTGCCAAGTCTCTCAGCACTCCTGGATATATACTCTTCTCCCCTCCCTCCAAAATTTGAAGCCCATTTCACTTCCACCAGGACCACCACCCTCTCCTCCCCACTGTCCCAAAACACTTCAATCCTCCAAACCCAATTAGGGTTTCGCATTCCAGCCAGGGTTAGGGTTCGCCGAAAATCCCTAGAGAAACTCCGAGAGATCAAGAATAGAGAAAAGATGGGGAGATACCGAAGCCAAAGCAGGAGTTACAGCCCGAGGCGAGGAAGGAGCCGTACACCACCTCGTCCTCGTCGTAAGCGCTACGATGACCCTCATGATCATCATCGATACCGCTCTTCTTCTTACCGCGGCCGCCGTTCTCCCGCTCCTTCTGGTCTTCTCGTTCGTAATGTCGCCCTTGATACCAGGCCTGAAGATCTGAGGATCCCCTTTGAGAAGTTTGGTGCAGTGAAGGACGTTTATTTGCCTAGAAACTACTATACTGGGGAGCCACGAGGCTTTGGATTTGTGAAATTTCGGCATCCTGATGATGCAGCTGAAGCAAAGGAACGACTGGATCACACAATAATTGGTGGGCGGGAGATACGAATAGTATATGCTGAGGAGAATCGCAAAACTCCTCAAGAAATGCGCAGGACTTCACATACAAGTGGGCCTAGTGGCAGATATGGAGGGAGAAGGAGGACTCCACCAAGGTCGCCGAGGCGCCGATATCGTTCCTACTCAAGGTCACTGTCTTCTGTAAGGCATCATTCAAGGTCTGTTTCTAGGTCCCGTTCCCCTCGCAGCGAAAGAGATTACAAGTCAACCAAGAGGTCCGCCAGCCCAAGGGAAAGCTCTCCTTGTGATGAAAGAGGATACAGGAAAAGGGAGAGGTCTCAAAGTCCAAGGAAGACTTCAGCAGGTGAGGAAAAGGAATACAAGTCTAGGAGGTCTTACAGTCCAAGAGAGTTGTCCCCTCATGATGGGAACTACTGGTCATCTAGGAGGTCTTTTAGTCCAAGTGAGGAATCTCCAAATTGTATGGGCAGCAAGACCAAACAGAGGGTTGCTACTTCAAGCAAAGTTTCTCCACATGATGATGACTATGAGTCAAAGAGGTCTCCTAGTCCTGAATATTTTTCCAAGCATGGAGTTAGGAGAGGTGCCTTGAGCCAATTTACACCTAGTCCGAGGTGGCTCTCCCCGATTGACGAGAGGGATGACAGGTTGAAAGATCGGTCCCTTAGTACAGAGGAAAATGATGGACATTCTCAGGATGGAAGAAGAGATTTGGCTTCCAGAAAGTCTGTCAGCCCTAGGAGGAATGGTAGGAGTGTGTCTCGTTCTCAGTCTCAATCTTATAGTCCCCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_156527.p1 GENE.R_Transcript_156527~~R_Transcript_156527.p1 ORF type:5prime_partial len:464 (+),score=77.21,RRM_1|PF00076.18|8.1e-18,RRM_6|PF14259.2|4.4e-14,RRM_5|PF13893.2|5e-06 R_Transcript_156527:2-1393(+)
YNLRPNPRFAYLLPSLSALLDIYSSPLPPKFEAHFTSTRTTTLSSPLSQNTSILQTQLGFRIPARVRVRRKSLEKLREIKNREKMGRYRSQSRSYSPRRGRSRTPPRPRRKRYDDPHDHHRYRSSSYRGRRSPAPSGLLVRNVALDTRPEDLRIPFEKFGAVKDVYLPRNYYTGEPRGFGFVKFRHPDDAAEAKERLDHTIIGGREIRIVYAEENRKTPQEMRRTSHTSGPSGRYGGRRRTPPRSPRRRYRSYSRSLSSVRHHSRSVSRSRSPRSERDYKSTKRSASPRESSPCDERGYRKRERSQSPRKTSAGEEKEYKSRRSYSPRELSPHDGNYWSSRRSFSPSEESPNCMGSKTKQRVATSSKVSPHDDDYESKRSPSPEYFSKHGVRRGALSQFTPSPRWLSPIDERDDRLKDRSLSTEENDGHSQDGRRDLASRKSVSPRRNGRSVSRSQSQSYSPR*

Click here to download the sequence:
Link to NCBI Protein BLAST