Transcript Information: R_Transcript_157038.p1


Annotated TAIR IDAT5G43410.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17435010-17435405 | Reverse length=131
E-Value9E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27448061586043
Replicate 21.341868823598
Replicate 30.25834666461826
Condition 2: 8 Hour
Replicate 11.3807818579274
Replicate 20.67250772454693
Replicate 30.7506305143769
Condition 3: 24 Hour
Replicate 11.2083056435634
Replicate 20
Replicate 30.16456920817216


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157038.p1 GENE.R_Transcript_157038~~R_Transcript_157038.p1 ORF type:5prime_partial len:266 (+),score=34.21,AP2|PF00847.16|3.4e-14 R_Transcript_157038:3-800(+)
ACTCTTCAAACTCATAAGATGGATACTTCTTCTTCCTTCTCTCAATACCAATACCAATACCAATACCAGCACCACCAACAAACAACCTCCGTGGAATCGGAATCCTCCTCCTCGTCCTCCACAGGGTCACCGGAATCCTTTCCTTACAACTCCCTATCACTACCTCAACTCCCATTCAACATCAACGACTCTGATGAGATTGCACGGTTTAACATGTTATCAGAGCAGGAAATACACCAACAGAAAAGACCCGCTTGTGGTAACACGTTAGCAACGACGGACTTGGACTCGCTAGAAGCTCAAGCACCACCACGTCATCGTCAGAAGAGGAGCTACAGGGGAGTCAGGCAGCGGCCGTGGGGGAAGTTTGCGGCTGAGATTCGAGACTCCACGAGGCACGGAGTACGAGTGTGGCTAGGGACGTTCGACACCGCAGAGGAGGCTGCTTTGGCGTACGACCAAGCGGCCTACGCCATGCGAGGGCCCACGGCCGTGTTGAACTTCCCCGTTGAGATTGTAAAGCAGTCTTTGAAGGAGATGAGAAGAGAAAACGGAGGACATAGATTGGTTGACCGAGATAAGGAAGGTTACTCTGCTTCCCCTGTTATAGCACTGAAGAGAGAACACCTACTGAGAAGGAAGTCAATGGGAACTAATGAGAGAAAGAGAAGAAGAGATAAAGATCAAGAAACCACTTCTTGTTCTTCTTCTTCTGCCACCACTAAAGCTGCCACTAGTATGGTAGTTTTTGAGGACTTGGGAGCTGATTACTTGGAGCAGCTATTGAGTTGTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157038.p1 GENE.R_Transcript_157038~~R_Transcript_157038.p1 ORF type:5prime_partial len:266 (+),score=34.21,AP2|PF00847.16|3.4e-14 R_Transcript_157038:3-800(+)
TLQTHKMDTSSSFSQYQYQYQYQHHQQTTSVESESSSSSSTGSPESFPYNSLSLPQLPFNINDSDEIARFNMLSEQEIHQQKRPACGNTLATTDLDSLEAQAPPRHRQKRSYRGVRQRPWGKFAAEIRDSTRHGVRVWLGTFDTAEEAALAYDQAAYAMRGPTAVLNFPVEIVKQSLKEMRRENGGHRLVDRDKEGYSASPVIALKREHLLRRKSMGTNERKRRRDKDQETTSCSSSSATTKAATSMVVFEDLGADYLEQLLSCC*

Click here to download the sequence:
Link to NCBI Protein BLAST