Transcript Information: R_Transcript_15718.p1


Annotated TAIR IDATMG01360.1
Annotated Gene Namecytochrome oxidase
Annotated Gene Symbol(s)COX1
Annotation TypeOrtholog
Chromosome PositionchrM:349830-351413 | Reverse length=527
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.00265869279
Replicate 233.554087712903
Replicate 332.898438376189
Condition 2: 8 Hour
Replicate 142.208967194775
Replicate 240.292179470022
Replicate 333.848431994969
Condition 3: 24 Hour
Replicate 126.849702167258
Replicate 240.119566172384
Replicate 335.979217418652


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15718.p1 GENE.R_Transcript_15718~~R_Transcript_15718.p1 ORF type:complete len:525 (+),score=-7.80,COX1|PF00115.16|6.8e-156 R_Transcript_15718:1009-2583(+)
ATGACAAATCTGGTTCGATGGCTGTTCTCCACTAACCACAAGGATATAGGGACTCTCTATTTCATCTTCGGTGCCATTGCTGGAGTGATGGGCACATGCTTTTCAGTACTGATTCGTATGGAATTAGCACGACCCGGCGATCAAATTCTTGGTGGAAATCATCAACTTTATAATGTTTTAATAACGGCTCACGCTTTTTTAATGATCTTTTTTATGGTTATGCCTGCGATGATAGGTGGATTTGGTAATTGGTTTGTTCCGATTCTGATAGGTGCACCTGACATGGCATTTCCACGATTAAATAATATTTCATTCTGGTTGTTGCCCCCAAGTCTCTTGCTCCTATTAAGCTCAGCCTTAGTAGAAGTGGGTAGCGGGACTGGGTGGACGGTCTATCCGCCCTTAAGTGGTATTACCAGCCATTCTGGAGGAGCAGTTGATTTAGCAATTTTTAGTCTTCATCTATCTGGTGTTTCATCCATTTTAGGTTCTATCAATTTTATAACAACTATCTTCAACATGCGTGGACCTGGAATGACTATGCATAGATTACCCTTATTTGTGTGGTCCGTTCTAGTAACAGCATTCCTACTTTTATTATCACTTCCGGTACTGGCGGGGGCAATTACCATGTTATTAACCGATCGAAACTTTAATACAACCTTTTTTGATCCCGCTGGTGGGGGAGACCCCATATTATATCAGCATCTATTTTGGTTTTTCGGTCATCCAGAGGTCTATATTCTCATTCTGCCTGGATTCGGTATCATAAGTCATATCGTTTCTACTTTTTCGGGAAAACCGGTCTTCGGGTATCTAGGCATGGTTTACGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTGTGGGCTTAGACGTTGATACCCGTGCTTACTTCACCGCAGCTACCATGATCATAGCGGTCCCCACTGGAATTAAAATATTTAGTTGGATCGCAACCATGTGGGGGGGTTCGATACAATACAAAACACCCATGTTATTTGCTGTAGGGTTCATCTTTTTGTTCACCATAGGAGGACTCACTGGAATAGTCCTGGCGAATTCTGGGCTAGACATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTATGGGAGCCGTTTTTGCTTTATTTGCAGGATTTTACTATTGGGTGGGCAAAATCTTTGGTCGAACATACCCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATCTTACCTTCTTCCCCATGCATTTTTTAGGGCTTTCGGGTATGCCACGTCGCATTCCAGATTATCCAGATGCTTACGCAGGATGGAATGCCCTTAGCAGTTTTGGCTCTTATATCTCCGTAGTTGGGATTTGTTGTTTCTTCGTGGTCGTAGCAATCACTTTAAGCAGTGGAAAGAACAAAAGATGCGCTCCAAGTCCTTGGGCTGTTGAAGAGAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAGCTTTTCACACTTTTGGAGAACTTCCAGCTATTAAGGAGACGAAAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15718.p1 GENE.R_Transcript_15718~~R_Transcript_15718.p1 ORF type:complete len:525 (+),score=-7.80,COX1|PF00115.16|6.8e-156 R_Transcript_15718:1009-2583(+)
MTNLVRWLFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVAITLSSGKNKRCAPSPWAVEENSTTLEWMVQSPPAFHTFGELPAIKETKS*

Click here to download the sequence:
Link to NCBI Protein BLAST