Transcript Information: R_Transcript_15726.p1


Annotated TAIR IDAT5G62940.1
Annotated Gene NameDof-type zinc finger DNA-binding family protein
Annotated Gene Symbol(s)HCA2, DOF5.6
Annotation TypeOrtholog
Chromosome Positionchr5:25257183-25258504 | Reverse length=372
E-Value2.2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83346853674515
Replicate 21.1504822145917
Replicate 31.2551637038988
Condition 2: 8 Hour
Replicate 10.78265321749186
Replicate 21.3273582828101
Replicate 31.8234494687147
Condition 3: 24 Hour
Replicate 10.83864135991613
Replicate 20.90638050235249
Replicate 32.1987648543915


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15726.p1 GENE.R_Transcript_15726~~R_Transcript_15726.p1 ORF type:5prime_partial len:219 (+),score=9.59,zf-Dof|PF02701.11|1.9e-24 R_Transcript_15726:3-659(+)
TTCTGCTACTACAACAACTACAGCTTATCACAACCCCGGTACTTCTGCAAAGGGTGCCGCCGCTACTGGACCCACGGCGGCACCCTTCGCAACGTTCCCGTTGGGGGCGGTTGCCGCAAGAGCAAACGCCCCAAGATCGCTTCTAATTCTTCCGCTACGTCATCAGTCAGTCAATCTCAGCCACCCCTAATTAACAACACTACCAACACCACCAACACCAACAACAACACTAACAACACCAACACCCTGTTGCCGTACTACGGGGGAGCTTCAACTGGAGGGTTCTTGTCATCATTAGCGGCGATCCAAGGGGCGACCCAGCCGCTCGGCTTTGGACCCAACTTGGGCCTCTTGCATGGGCTGGGCCTCCCGGCCTTCGATCATCAACAACAACATCATCAACAACCACCACCATCAGTTGCACAACAGCATAACCAAGTGCCGCCTAGTTTTCAGCAACTCCTTCAACAGCGTCATGATAATATTTTCCCGGGAACGGAGATTGGCCTTGTTCCGACCCCCGCCACCGGGGCCAACGATTGGAATCTTAACAACCTTAACAACAACAACGACGATGACAACAACAACAACAGCGTCAACAACAGTCAAAATCAGTGGCCGGATTTTCGGGGAAGCAGCGGGCTTGACGATCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15726.p1 GENE.R_Transcript_15726~~R_Transcript_15726.p1 ORF type:5prime_partial len:219 (+),score=9.59,zf-Dof|PF02701.11|1.9e-24 R_Transcript_15726:3-659(+)
FCYYNNYSLSQPRYFCKGCRRYWTHGGTLRNVPVGGGCRKSKRPKIASNSSATSSVSQSQPPLINNTTNTTNTNNNTNNTNTLLPYYGGASTGGFLSSLAAIQGATQPLGFGPNLGLLHGLGLPAFDHQQQHHQQPPPSVAQQHNQVPPSFQQLLQQRHDNIFPGTEIGLVPTPATGANDWNLNNLNNNNDDDNNNNSVNNSQNQWPDFRGSSGLDDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST