Transcript Information: R_Transcript_15728.p1


Annotated TAIR IDAT5G62940.1
Annotated Gene NameDof-type zinc finger DNA-binding family protein
Annotated Gene Symbol(s)HCA2, DOF5.6
Annotation TypeOrtholog
Chromosome Positionchr5:25257183-25258504 | Reverse length=372
E-Value5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6763784264155
Replicate 22.7763703029816
Replicate 33.9755495001587
Condition 2: 8 Hour
Replicate 11.7200814219139
Replicate 23.0492111601617
Replicate 33.5253128064388
Condition 3: 24 Hour
Replicate 14.4587476847194
Replicate 24.3745968047426
Replicate 34.6126980951726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15728.p1 GENE.R_Transcript_15728~~R_Transcript_15728.p1 ORF type:5prime_partial len:242 (+),score=3.64,zf-Dof|PF02701.11|2.5e-29 R_Transcript_15728:3-728(+)
AACAACCGGCGAATACAGCCGGTGCTCGGCCCCAATCAGAATCAGCACCCGCCGCCACAGCCGTGCCCGCGGTGTCACTCGAGCAACACCAAATTCTGCTACTACAACTACAGCTTATCCCAACCCCGGTATTTCTGCAAAGGGTGCCGCCGCTACTGGACCCACGGCGGCACCCTTCGCAACGTTCCCGTTGGGGGCGGTTGCCGCAAGAGCAAACGCCCCAAGATCGCTTCTAATTCTTCCGCCACGTCATCAGTCACTCAATCTCAGCCGCCCCTAATTAACAACACCACTACCACCAACACCAACAACAACACTAACAACCTGTTGCCGTACTACGGGGGAGCTTCAACTGGAGGGTTCTTGTCATCATTAGCGGCGATCCAAGGGGCGACCCAGCCGCTCGGCTTTGGACCCAACTTGGGCCTCTTGCATGGGCTGGGCCTCCCGGCCTTCGATCATCAACAACATCATCAACAATCAGTTGCACAACACCATAACCAAGAGCCGCCTAGTTTTCAGCAACTCCTTCAACAGCGTCATGATAATATTTTCCCGGGAACGGAGATTGGCCTTGTTCCGACCCCCGCCACCGGGGCCAACGATTGGAATCTTAACAACCTTAACAACAACAACAACGACGATGACAACAACAACAACAGCGTCAACAACAGTCAAAATCAGTGGCCGGATTTTCCGGGAAGCAGTGGGCTTGACGATCCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15728.p1 GENE.R_Transcript_15728~~R_Transcript_15728.p1 ORF type:5prime_partial len:242 (+),score=3.64,zf-Dof|PF02701.11|2.5e-29 R_Transcript_15728:3-728(+)
NNRRIQPVLGPNQNQHPPPQPCPRCHSSNTKFCYYNYSLSQPRYFCKGCRRYWTHGGTLRNVPVGGGCRKSKRPKIASNSSATSSVTQSQPPLINNTTTTNTNNNTNNLLPYYGGASTGGFLSSLAAIQGATQPLGFGPNLGLLHGLGLPAFDHQQHHQQSVAQHHNQEPPSFQQLLQQRHDNIFPGTEIGLVPTPATGANDWNLNNLNNNNNDDDNNNNSVNNSQNQWPDFPGSSGLDDP*

Click here to download the sequence:
Link to NCBI Protein BLAST