Transcript Information: R_Transcript_157282.p1


Annotated TAIR IDAT3G62110.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22997313-22999503 | Reverse length=471
E-Value2.4E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.029451160136
Replicate 20.50099632229779
Replicate 30.44720312009842
Condition 2: 8 Hour
Replicate 10.42491739604764
Replicate 20.2910310001022
Replicate 30.59061639762647
Condition 3: 24 Hour
Replicate 10.84660026653139
Replicate 20.95684420349576
Replicate 31.661756321131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157282.p1 GENE.R_Transcript_157282~~R_Transcript_157282.p1 ORF type:complete len:461 (+),score=57.90,Glyco_hydro_28|PF00295.13|1.7e-38,Pectate_lyase_3|PF12708.3|6.9e-13,Pectate_lyase_3|PF12708.3|1.6e+02 R_Transcript_157282:237-1619(+)
ATGAAGATGAATTTGGTTATAGTGATTGTGTGTGTAATTGTCAGTGAATTTGGTTGTGGTCATAGTAGTTATTGTACTACTCCCCCAAGATCAGCACAATTCCGGAAATACAGTGTTTCCATAACTGAATTTGGAGGTGTTGGAGATGGGCTTACCCTTAATACCAAAGCCTTTCATGATGCTATCCACCATCTTACTCCTTTCTCTCACAAGGATGGGGCCCAGCTCATCATCCCTGCTGGCCGCTGGTTGACTGGAAGCTTTGGCCTTATCAGTCATCTCACTTTGTGGCTCCATAGTGATGCTGTCTTACTCGCATCCAAGAACTCAGATGATTGGCCTATTGTGGATCCTTTACCTTCCTATGGGCGAGGCAGGGAGTTGCCTGGTAGGAGATACCAGAGTCTTATTTATGGACACAACTTGACAGACGTCATTATAACAGGTCACAATGGAACTATTGATGGCCAAGGTCATGTTTGGTGGGACTGGTTTCACAACAACACCCTAAGCTATACTCGGCCTCACTTGCTTGAATTCATCAACTCAACTGAGATAATCATCTCAAATATGACCTTTGTAAACTCCCCATTCTGGAATATCCACCCTGTATATTGCAGCAAGGTGGTCATCCAGAATCTTACCATTCTTGCACCTTATTATTCCCCCAACACAGACGGCATAGATCCAGATTCTTCAAATGATGTTTGCATTGAAGATTGTTACATTAGCACTGGTGATGATCTGGTTGCAATTAAAAGTGGGTGGGATGAATATGGTATCTCGTTTGCTCGTCCAAGCACAAACATCAACATCTACAGGCTGAGAGGAGAAACTCAAAGCTCTGGTATAACAATCGGAAGTGAAATGTCTGGAGGAGTGTCAGAAGTTTACATAGAAGACCTCCTTGTTTTTAACACCGAAACAGCTATTACGATACGAACATCGCCTGGACGGGGTGGGTATATCAGAAATGTGTGCATATCAAATGTGTTCATGACGGATGTAACAACAGCCATATGGTTCAATAGTCAATATGGTCAGCATCCAGACAAGCACTATGACCCAAGAGCCTTACCTGTGGTAGAAAAAATTGCTATAAGAGATGTCAGGGGAGACAATGTTAAAGTTGCCGGCTTATTGGAGGGCATAGAAGTGGATGATTTCATGGACGTCTGCCTGTATAACATTACCCTGAGTGTTACTTCAACGTTCCCATGGAACTGTTCATATGTTCAAGGATATTCTGAGTTGGTTTCTCCACCATCATGCGAAGCTTTGAGGAAGACAAAGCGTTATACAGATTGCTATCGTGCAGTACCAAGTTGTTGGAAGAGAGAGATGGATCGATCCTTTCCAAGGAATCACCTCCGCCCATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157282.p1 GENE.R_Transcript_157282~~R_Transcript_157282.p1 ORF type:complete len:461 (+),score=57.90,Glyco_hydro_28|PF00295.13|1.7e-38,Pectate_lyase_3|PF12708.3|6.9e-13,Pectate_lyase_3|PF12708.3|1.6e+02 R_Transcript_157282:237-1619(+)
MKMNLVIVIVCVIVSEFGCGHSSYCTTPPRSAQFRKYSVSITEFGGVGDGLTLNTKAFHDAIHHLTPFSHKDGAQLIIPAGRWLTGSFGLISHLTLWLHSDAVLLASKNSDDWPIVDPLPSYGRGRELPGRRYQSLIYGHNLTDVIITGHNGTIDGQGHVWWDWFHNNTLSYTRPHLLEFINSTEIIISNMTFVNSPFWNIHPVYCSKVVIQNLTILAPYYSPNTDGIDPDSSNDVCIEDCYISTGDDLVAIKSGWDEYGISFARPSTNINIYRLRGETQSSGITIGSEMSGGVSEVYIEDLLVFNTETAITIRTSPGRGGYIRNVCISNVFMTDVTTAIWFNSQYGQHPDKHYDPRALPVVEKIAIRDVRGDNVKVAGLLEGIEVDDFMDVCLYNITLSVTSTFPWNCSYVQGYSELVSPPSCEALRKTKRYTDCYRAVPSCWKREMDRSFPRNHLRPL*

Click here to download the sequence:
Link to NCBI Protein BLAST