Transcript Information: R_Transcript_157283.p1


Annotated TAIR IDAT3G62110.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22997313-22999503 | Reverse length=471
E-Value4E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3888122465547
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.153319725776
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.497248297459
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157283.p1 GENE.R_Transcript_157283~~R_Transcript_157283.p1 ORF type:5prime_partial len:276 (+),score=28.92,Glyco_hydro_28|PF00295.13|2e-25 R_Transcript_157283:2-829(+)
CCTCCTTATGCTTGCTCTTCTTTGAACTGTGTCCCGCTTTATCACTCAATAAACTTCATGCACAGCAAGGTGGTCATCCAGAATCTTACCATTCTTGCACCTTATTATTCCCCCAACACAGACGGCATAGATCCAGATTCTTCAAATGATGTTTGCATTGAAGATTGTTACATTAGCACTGGTGATGATCTGGTTGCAATTAAAAGTGGGTGGGATGAATATGGTATCTCGTTTGCTCGTCCAAGCACAAACATCAACATCTACAGGCTGAGAGGAGAAACTCAAAGCTCTGGTATAACAATCGGAAGTGAAATGTCTGGAGGAGTGTCAGAAGTTTACATAGAAGACCTCCTTGTTTTTAACACCGAAACAGCTATTACGATACGAACATCGCCTGGACGGGGTGGGTATATCAGAAATGTGTGCATATCAAATGTGTTCATGACGGATGTAACAACAGCCATATGGTTCAATAGTCAATATGGTCAGCATCCAGACAAGCACTATGACCCAAGAGCCTTACCTGTGGTAGAAAAAATTGCTATAAGAGATGTCAGGGGAGACAATGTTAAAGTTGCCGGCTTATTGGAGGGCATAGAAGTGGATGATTTCATGGACGTCTGCCTGTATAACATTACCCTGAGTGTTACTTCAACGTTCCCATGGAACTGTTCATATGTTCAAGGATATTCTGAGTTGGTTTCTCCACCATCATGCGAAGCTTTGAGGAAGACAAAGCGTTATACAGATTGCTATCGTGCAGTACCAAGTTGTTGGAAGAGAGAGATGGATCGATCCTTTCCAAGGAATCACCTCCGCCCATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157283.p1 GENE.R_Transcript_157283~~R_Transcript_157283.p1 ORF type:5prime_partial len:276 (+),score=28.92,Glyco_hydro_28|PF00295.13|2e-25 R_Transcript_157283:2-829(+)
PPYACSSLNCVPLYHSINFMHSKVVIQNLTILAPYYSPNTDGIDPDSSNDVCIEDCYISTGDDLVAIKSGWDEYGISFARPSTNINIYRLRGETQSSGITIGSEMSGGVSEVYIEDLLVFNTETAITIRTSPGRGGYIRNVCISNVFMTDVTTAIWFNSQYGQHPDKHYDPRALPVVEKIAIRDVRGDNVKVAGLLEGIEVDDFMDVCLYNITLSVTSTFPWNCSYVQGYSELVSPPSCEALRKTKRYTDCYRAVPSCWKREMDRSFPRNHLRPL*

Click here to download the sequence:
Link to NCBI Protein BLAST