Transcript Information: R_Transcript_157286.p1


Annotated TAIR IDAT3G62110.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22997313-22999503 | Reverse length=471
E-Value3E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.41494664854344
Replicate 30.90540464806927
Condition 2: 8 Hour
Replicate 10.19356414978059
Replicate 20.79544638960739
Replicate 30.78920046175596
Condition 3: 24 Hour
Replicate 12.3593003475111
Replicate 21.3947989812223
Replicate 31.4707153346927


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_157286.p1 GENE.R_Transcript_157286~~R_Transcript_157286.p1 ORF type:complete len:253 (+),score=23.98,Glyco_hydro_28|PF00295.13|3.8e-16 R_Transcript_157286:255-1013(+)
ATGATCATCGTAAATGTTTTTTCTCACACAATAACCTTACCAGTTACCTGTGAATATGAATCCCCAGATTCTTCAAATGATGTTTGCATTGAAGATTGTTACATTAGCACTGGTGATGATCTGGTTGCAATTAAAAGTGGGTGGGATGAATATGGTATCTCGTTTGCTCGTCCAAGCACAAACATCAACATCTACAGGCTGAGAGGAGAAACTCAAAGCTCTGGTATAACAATCGGAAGTGAAATGTCTGGAGGAGTGTCAGAAGTTTACATAGAAGACCTCCTTGTTTTTAACACCGAAACAGCTATTACGATACGAACATCGCCTGGACGGGGTGGGTATATCAGAAATGTGTGCATATCAAATGTGTTCATGACGGATGTAACAACAGCCATATGGTTCAATAGTCAATATGGTCAGCATCCAGACAAGCACTATGACCCAAGAGCCTTACCTGTGGTAGAAAAAATTGCTATAAGAGATGTCAGGGGAGACAATGTTAAAGTTGCCGGCTTATTGGAGGGCATAGAAGTGGATGATTTCATGGACGTCTGCCTGTATAACATTACCCTGAGTGTTACTTCAACGTTCCCATGGAACTGTTCATATGTTCAAGGATATTCTGAGTTGGTTTCTCCACCATCATGCGAAGCTTTGAGGAAGACAAAGCGTTATACAGATTGCTATCGTGCAGTACCAAGTTGTTGGAAGAGAGAGATGGATCGATCCTTTCCAAGGAATCACCTCCGCCCATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_157286.p1 GENE.R_Transcript_157286~~R_Transcript_157286.p1 ORF type:complete len:253 (+),score=23.98,Glyco_hydro_28|PF00295.13|3.8e-16 R_Transcript_157286:255-1013(+)
MIIVNVFSHTITLPVTCEYESPDSSNDVCIEDCYISTGDDLVAIKSGWDEYGISFARPSTNINIYRLRGETQSSGITIGSEMSGGVSEVYIEDLLVFNTETAITIRTSPGRGGYIRNVCISNVFMTDVTTAIWFNSQYGQHPDKHYDPRALPVVEKIAIRDVRGDNVKVAGLLEGIEVDDFMDVCLYNITLSVTSTFPWNCSYVQGYSELVSPPSCEALRKTKRYTDCYRAVPSCWKREMDRSFPRNHLRPL*

Click here to download the sequence:
Link to NCBI Protein BLAST